KEGG   Ricinus communis (castor bean): 107260795
Entry
107260795         CDS       T01087                                 
Name
(RefSeq) protein CHROMATIN REMODELING 35
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107260795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcu03400]
    107260795
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     107260795
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII AAA_16
Other DBs
NCBI-GeneID: 107260795
NCBI-ProteinID: XP_015570930
LinkDB
Position
8:12831976..12838778
AA seq 887 aa
MEIAPLMVLPQNHTTPNESYSKGYKRVKLSNDGDDYGSIPVATTLTYNGTGENKPKSPSP
KVVDYSDPFAISSMIDKLDSGKYGSVTKEIEALISRKIHALSPYLKKHPTLTDIFLDGNK
CPNEEDASKAQNNVIDLEDASVVNHCSAVARPLVILDSDDEDSGDCRPTPPFQEVLLPRP
DGLLFMDTSVKTYEERNSHGNLVSLSSEIDIKREKGVYVGVEEYDDDQSKPEDDGLGDIW
KEMSVAMEFSKDVAEYPSSDEHMEDDEEHCDHSFVLKDDIGYVCRICGVIERGIETIIEV
QFLKKKSTRTYVSEPRNTKDRDSNEMVGVALSEEDLMVTDISAHPRHMKQMKPHQVEGFN
FLRSNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHARPLVILPKGILATWKKEF
LTWQVENIPLYDFYSVKADSRLQQLEILKQWVEQKSILFLGYKQFSSIVCDDANNKVAAN
CQEILLKRPTILILDEGHTPRNENTDVLQSLAKVQTPRKVVLSGTLYQNHVKEVFNILNL
VRPKFLRLDTSRAIVKRIMSKVHIQGVKKHLKTGETVFYDLVEHTIQKDHDFKRKVTVIQ
DLREMTSKVLHYYKGDFLDELPGLVDFTVVLKLSLKQKHEVQNLKKLARKFKRSSVGSAV
YLHPKLNSVTENSALTDDKMDEFLEKLDVRDGAKAKFFLNMLNLCALAGEKLLVFSQYLP
PLKFLERLVVKVKGWVLGREIFVISGESSSDQREWSMERFNNSTDAKVFFGSIKACGEGI
SLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVYAYRLVAGDSPEEEDHSTCFRKEA
IAKMWFEWNEYCGYQDFEVERIELKECGDPFLESPLVKEDIRELYKR
NT seq 2664 nt   +upstreamnt  +downstreamnt
atggagattgctcctcttatggttttgcctcaaaatcacacgactcctaatgagtcatat
tccaagggatacaaaagggtaaaactatctaatgatggagatgactatggtagcattccc
gtggctactacattaacttacaatggaactggagaaaacaaaccaaaatcaccgtcacct
aaagttgttgactattctgatccttttgctatatccagtatgattgataagttagattct
ggtaaatatggaagtgttaccaaagagatagaagctcttatttctcgcaagattcatgcg
cttagtccttatctcaagaagcatcctacacttacagatatattcttggatgggaataag
tgccctaatgaagaagatgcttcaaaggcacagaataatgtcattgatttggaggatgct
agtgttgtaaatcattgttcagcagtagcaaggcctcttgtaattctggattctgacgat
gaagacagtggagattgtaggcccactcctcccttccaggaggttcttttgccaagacct
gatgggctacttttcatggacacatcagttaaaacctatgaagagagaaacagccatgga
aatttagtaagtttatccagtgaaattgatatcaagagagagaaaggtgtttatgttggt
gtagaggagtatgatgatgatcaatctaaaccagaagatgatggccttggagacatttgg
aaggagatgtcagtagcaatggaattttctaaggatgttgctgagtatccttcatctgat
gaacacatggaagatgatgaagaacattgcgatcactcttttgttttgaaggatgatatt
ggttatgtttgtcgcatatgtggggttattgagcgaggaattgagaccataattgaggtt
cagtttctcaaaaaaaagagtacgcggacatatgtatctgaacctcgaaataccaaggac
agagattcaaacgagatggtcggagttgcattgtctgaagaagatttgatggtaactgat
atctctgctcatccaaggcacatgaagcaaatgaaacctcatcaagtggagggttttaat
tttcttcgaagtaacttagtgacagataatccagggggctgcatcttggctcatgctcct
ggatctggaaagacgttcatgattatcagtttcatgcagagcttcctagccaagtatcca
cacgctagaccgctagtgatacttcccaaaggaattttagctacatggaaaaaggagttt
ctgacatggcaagttgaaaatattccactctatgacttttatagcgtaaaagcagatagt
cgtttacagcaattagagatcctgaaacagtgggtggagcagaagagcatccttttctta
ggctacaaacaattctcttctattgtttgtgatgatgctaacaacaaggttgcagctaat
tgtcaagagatactactgaagcgacctacaattctaattttagatgaagggcacactcca
aggaatgagaacactgatgttctgcaatcccttgctaaggtgcagacacctcgaaaagtt
gtgctttcaggaactctttaccaaaatcatgtcaaggaggtgttcaacatattgaatctt
gttcgcccaaagtttctgaggttggatacttccagggctattgtcaagcgtatcatgagt
aaagtacatatacaaggcgtgaagaagcatctcaaaacaggagagacggtattttatgat
ttggtagagcacacaatacagaaagatcatgattttaagaggaaagttactgtcatacaa
gacctgcgtgaaatgaccagcaaggtccttcattattataaaggagatttcttggatgag
ctacctggacttgttgatttcactgtagtacttaagcttagtttaaaacagaagcatgaa
gttcaaaacttgaagaagttggcaaggaaattcaagagaagttccgttgggagtgctgtt
tatcttcatccaaagttgaactctgtcactgagaattctgccttgactgatgacaaaatg
gatgagttcttagaaaagttagatgtgagagatggagccaaggctaaattctttcttaat
atgttgaacttatgtgcgttagctggggaaaagttactggttttcagccagtacctccct
ccattgaagtttttggagagactggtggtgaaggtgaaaggttgggttctaggaagggaa
atctttgtgatctcaggtgaatcaagttctgatcagcgggagtggtccatggagcgtttc
aataattccacagatgcaaaagttttctttggatcaattaaggcctgtggagagggaata
tcattggttggggcatcacgcattattattttggatgttcatctgaatccatcagttact
cgccaagcaattggacgtgctttccgtccaggtcagacaaagaaagtttatgcatataga
ttagttgctggagattcacctgaggaggaagatcatagcacatgttttaggaaggaagct
attgcaaagatgtggtttgaatggaatgaatattgtggttatcaggattttgaagtggag
agaattgagttgaaggagtgtggtgatccctttttagaaagtccactagtaaaggaagac
ataagggaattgtacaaaaggtag

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