Ricinus communis (castor bean): 107260795
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Entry
107260795 CDS
T01087
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107260795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
107260795
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107260795
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
107260795
NCBI-ProteinID:
XP_015570930
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Position
8:12831976..12838778
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AA seq
887 aa
AA seq
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MEIAPLMVLPQNHTTPNESYSKGYKRVKLSNDGDDYGSIPVATTLTYNGTGENKPKSPSP
KVVDYSDPFAISSMIDKLDSGKYGSVTKEIEALISRKIHALSPYLKKHPTLTDIFLDGNK
CPNEEDASKAQNNVIDLEDASVVNHCSAVARPLVILDSDDEDSGDCRPTPPFQEVLLPRP
DGLLFMDTSVKTYEERNSHGNLVSLSSEIDIKREKGVYVGVEEYDDDQSKPEDDGLGDIW
KEMSVAMEFSKDVAEYPSSDEHMEDDEEHCDHSFVLKDDIGYVCRICGVIERGIETIIEV
QFLKKKSTRTYVSEPRNTKDRDSNEMVGVALSEEDLMVTDISAHPRHMKQMKPHQVEGFN
FLRSNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHARPLVILPKGILATWKKEF
LTWQVENIPLYDFYSVKADSRLQQLEILKQWVEQKSILFLGYKQFSSIVCDDANNKVAAN
CQEILLKRPTILILDEGHTPRNENTDVLQSLAKVQTPRKVVLSGTLYQNHVKEVFNILNL
VRPKFLRLDTSRAIVKRIMSKVHIQGVKKHLKTGETVFYDLVEHTIQKDHDFKRKVTVIQ
DLREMTSKVLHYYKGDFLDELPGLVDFTVVLKLSLKQKHEVQNLKKLARKFKRSSVGSAV
YLHPKLNSVTENSALTDDKMDEFLEKLDVRDGAKAKFFLNMLNLCALAGEKLLVFSQYLP
PLKFLERLVVKVKGWVLGREIFVISGESSSDQREWSMERFNNSTDAKVFFGSIKACGEGI
SLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVYAYRLVAGDSPEEEDHSTCFRKEA
IAKMWFEWNEYCGYQDFEVERIELKECGDPFLESPLVKEDIRELYKR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggagattgctcctcttatggttttgcctcaaaatcacacgactcctaatgagtcatat
tccaagggatacaaaagggtaaaactatctaatgatggagatgactatggtagcattccc
gtggctactacattaacttacaatggaactggagaaaacaaaccaaaatcaccgtcacct
aaagttgttgactattctgatccttttgctatatccagtatgattgataagttagattct
ggtaaatatggaagtgttaccaaagagatagaagctcttatttctcgcaagattcatgcg
cttagtccttatctcaagaagcatcctacacttacagatatattcttggatgggaataag
tgccctaatgaagaagatgcttcaaaggcacagaataatgtcattgatttggaggatgct
agtgttgtaaatcattgttcagcagtagcaaggcctcttgtaattctggattctgacgat
gaagacagtggagattgtaggcccactcctcccttccaggaggttcttttgccaagacct
gatgggctacttttcatggacacatcagttaaaacctatgaagagagaaacagccatgga
aatttagtaagtttatccagtgaaattgatatcaagagagagaaaggtgtttatgttggt
gtagaggagtatgatgatgatcaatctaaaccagaagatgatggccttggagacatttgg
aaggagatgtcagtagcaatggaattttctaaggatgttgctgagtatccttcatctgat
gaacacatggaagatgatgaagaacattgcgatcactcttttgttttgaaggatgatatt
ggttatgtttgtcgcatatgtggggttattgagcgaggaattgagaccataattgaggtt
cagtttctcaaaaaaaagagtacgcggacatatgtatctgaacctcgaaataccaaggac
agagattcaaacgagatggtcggagttgcattgtctgaagaagatttgatggtaactgat
atctctgctcatccaaggcacatgaagcaaatgaaacctcatcaagtggagggttttaat
tttcttcgaagtaacttagtgacagataatccagggggctgcatcttggctcatgctcct
ggatctggaaagacgttcatgattatcagtttcatgcagagcttcctagccaagtatcca
cacgctagaccgctagtgatacttcccaaaggaattttagctacatggaaaaaggagttt
ctgacatggcaagttgaaaatattccactctatgacttttatagcgtaaaagcagatagt
cgtttacagcaattagagatcctgaaacagtgggtggagcagaagagcatccttttctta
ggctacaaacaattctcttctattgtttgtgatgatgctaacaacaaggttgcagctaat
tgtcaagagatactactgaagcgacctacaattctaattttagatgaagggcacactcca
aggaatgagaacactgatgttctgcaatcccttgctaaggtgcagacacctcgaaaagtt
gtgctttcaggaactctttaccaaaatcatgtcaaggaggtgttcaacatattgaatctt
gttcgcccaaagtttctgaggttggatacttccagggctattgtcaagcgtatcatgagt
aaagtacatatacaaggcgtgaagaagcatctcaaaacaggagagacggtattttatgat
ttggtagagcacacaatacagaaagatcatgattttaagaggaaagttactgtcatacaa
gacctgcgtgaaatgaccagcaaggtccttcattattataaaggagatttcttggatgag
ctacctggacttgttgatttcactgtagtacttaagcttagtttaaaacagaagcatgaa
gttcaaaacttgaagaagttggcaaggaaattcaagagaagttccgttgggagtgctgtt
tatcttcatccaaagttgaactctgtcactgagaattctgccttgactgatgacaaaatg
gatgagttcttagaaaagttagatgtgagagatggagccaaggctaaattctttcttaat
atgttgaacttatgtgcgttagctggggaaaagttactggttttcagccagtacctccct
ccattgaagtttttggagagactggtggtgaaggtgaaaggttgggttctaggaagggaa
atctttgtgatctcaggtgaatcaagttctgatcagcgggagtggtccatggagcgtttc
aataattccacagatgcaaaagttttctttggatcaattaaggcctgtggagagggaata
tcattggttggggcatcacgcattattattttggatgttcatctgaatccatcagttact
cgccaagcaattggacgtgctttccgtccaggtcagacaaagaaagtttatgcatataga
ttagttgctggagattcacctgaggaggaagatcatagcacatgttttaggaaggaagct
attgcaaagatgtggtttgaatggaatgaatattgtggttatcaggattttgaagtggag
agaattgagttgaaggagtgtggtgatccctttttagaaagtccactagtaaaggaagac
ataagggaattgtacaaaaggtag
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