Ricinus communis (castor bean): 8259078
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Entry
8259078 CDS
T01087
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8259078
03041 Spliceosome [BR:
rcu03041
]
8259078
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
8259078
Spliceosome [BR:
rcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
8259078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_PARP14_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
8259078
NCBI-ProteinID:
XP_002516242
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All DBs
Position
3:29021430..29026163
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AA seq
411 aa
AA seq
DB search
MMQHHRLKQQAMMPYPHPALVAAPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLL
QEVFSNTGLIEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASS
QREDTSGHFNIFVGDLSPEVTDATLYASFALFPSCSDARVMWDQKTGRSRGFGFVSFRNQ
QDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDDKQSSDAKSVVELTNGTSEDSQEKNDD
APENNPQYTTVYVGNLAPEVTSVDLHRHFYGLGAGTIEDVRVQRDKGFGFVRYSTHAEAA
LAIQMGNARILYGKPVKCSWGSKPTPPGTSSTPLPPPAAVRMPGFSAAELATYERQMALS
KMAGAQALMHPQSQLALKQAVMGMGAVGTSQAIYDGGFQNVATTQQLMYYH
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcatcacaggcttaagcaacaagccatgatgccgtaccctcatcctgctctc
gtagcagctcctcagatagaacctatcttgagtggaaatctgcctcctggttttgattca
actacatgccgaagtgtatacgtaggaaatatccaccctcaggttacagaaccccttctt
caagaggttttctcaaacactggactcattgaaggatgtaaactgattaggaaagagaag
tcatcctatggttttgttgattactttgatcgcagatcagctgctctttccattgtgacc
cttaatggaagacatctgtttggacaacctattaaagtgaattgggcctatgctagtagt
caaagagaagatacatcaggccatttcaatatttttgttggtgatcttagcccagaagtt
acagatgctacattgtatgcaagtttcgctttgtttcctagttgttcagatgcaagggtt
atgtgggaccagaagactgggcgctcaaggggttttgggtttgtttctttcaggaatcag
caggatgctcagaatgcaataaatgaattaaatgggaaatggattggaagccgacaaatt
cggtgtaactgggctgcaaaaggtactacatcaaatgatgacaagcagagttctgatgcc
aaaagtgtggtagagctaacaaatggaacatcagaagacagccaagaaaagaatgatgat
gcgccagaaaacaatcctcagtataccactgtatatgttggcaatcttgctcctgaggtt
acttctgtggatctccatcggcatttctatggacttggtgctgggactatagaggatgtg
cgggtgcaacgcgataaaggttttggtttcgtaagatatagcacgcatgctgaagctgcc
cttgctattcagatgggaaatgctcgtattctatatggcaaaccagtaaagtgttcatgg
ggtagcaaacccactccaccaggaacaagctctaccccccttcccccgccagctgctgtg
cggatgccgggtttttcagctgctgagcttgcaacctatgaacggcagatggctttgagt
aaaatggcgggtgcacaagctctaatgcacccacaaagtcagctagctctgaagcaggca
gtcatgggaatgggtgcagtcggcactagtcaggcaatatacgatggtgggttccaaaat
gttgcaacgacccagcagcttatgtactaccattag
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