Ricinus communis (castor bean): 8269657
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Entry
8269657 CDS
T01087
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Module
rcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8269657
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
8269657
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Nab2-zf4
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
8269657
NCBI-ProteinID:
XP_002529091
UniProt:
B9SSX2
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Position
1:12161492..12164031
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AA seq
392 aa
AA seq
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MANPINCIIHVVLLVSFTSYSAMASVQYNVLNFGAKPDGKTDSAKAFLAAWTQACASTKS
STIYVPNGRFFLSKIAFQGSCKNNAIGFSIGGTLVAPSDYRVLGSAKNWIIFQHVNGVTV
SGGTLDGQGTGLWSCKASGKSCPYGATSLEFTNSNNIVIKGLASLNSQLFHIVINECQNV
KVQGVKISASGSSPNTDGIHVEASTGVTILSSKIGTGDDCVSIGPGTSNLWIENVACGPG
HGISIGSLGKDAQENGVQNVTVTASTFTGTDNGVRIKTWGRPSSGFARSIRFQHVVMNNV
QNPIVIDQNYCPDNKNCPGQVSGVKISDVTYLDIHGSSATEVAVKFDCSKKYPCSGIKLQ
DVKLTYMNQPAEAACANAGGTASGYVQPTSCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacccaattaactgtattatccatgtagtcctcttggtttcctttacctcatat
tcagcaatggcatctgtgcaatacaatgtgctgaattttggggccaaacctgacggcaaa
acagattcagcaaaggcatttcttgctgcctggacacaagcatgcgcctctacgaaatca
tccaccatttatgttcctaatggaaggttcttcctaagcaaaatagcatttcaaggttct
tgcaagaacaatgctattgggttcagtataggcggcacccttgtcgctccttcagattat
agggtccttggaagtgccaagaattggataatctttcaacatgttaatggggttactgtt
tctggtggaactcttgatggtcaaggcacaggattgtggtcctgcaaggcttctggcaag
agttgcccctacggtgcaacgtcactggaattcacaaattcaaacaacattgtaatcaag
ggattagcatcgctaaacagtcaactgttccacattgtcatcaatgaatgccaaaacgtc
aaagttcaaggggtgaaaatctcagcctccggcagtagccccaacactgatggcattcat
gttgaagcatcaactggtgtcacaatcctcagctctaaaattggaacaggggatgattgt
gtgtcaattggtcctggtacctctaatttgtggattgaaaatgttgcatgtggtcctggc
catggtatcagcattggaagtttaggtaaggatgctcaagaaaatggagtgcagaatgtg
acagtcactgctagtacatttactggtacagataatggagtgagaatcaagacttgggga
agacccagcagtggttttgctagaagcattcgttttcagcatgttgtcatgaataacgtt
cagaatccaattgtgattgaccaaaattactgcccagataacaagaattgccctggtcag
gtttccggagtaaaaattagtgatgtgacatatttagacatacatggatcatcagcaaca
gaagttgcagtaaaatttgattgcagcaagaagtacccatgcagtgggattaaattacaa
gatgtaaagctcacttacatgaaccaaccagctgaagcagcatgtgccaatgctggtgga
acagcttctggctatgttcagcccacaagctgtctatga
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