Ricinus communis (castor bean): 8271701
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Entry
8271701 CDS
T01087
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8271701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8271701
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
8271701
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
8271701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
8271701
NCBI-ProteinID:
XP_048234038
LinkDB
All DBs
Position
8:17358566..17383024
Genome browser
AA seq
1413 aa
AA seq
DB search
MRKTQQKQQDIVYTKQPYIEDAGPRRIKSMQFTMMSGAEILKAAECQVHLGSYYDSTRKP
IQAGLLDPRLGPATKQSSACETCGADFHECPGHFGYLNLVLPVFNVGYMSNILDILKCIC
KSCSRILYDEKLCKADLKKMRNPRIEHLRKSELVKKIVKKCSSMTSNKAVKCTRCGDMNG
MVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTKESRAPISLATYILTPVKVLSLFKRIP
EEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTDGLQSNENDITERLKQIIQANASLRM
ELLEGRMSVNKYLDSWDGLQAAVALYMNSDVRVPNNVEVGKPLSGFVQRLKGKQGRFRGN
LSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSHHNIEKLRQLVSNGPQKY
PGASTVRYPDGSSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVLFNRQPSLHRMSIMCH
RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGE
ILVASTQDFLTSSFLITRRDTFYDRAAFSLMCSYMNDGMDLIDLPTPAILKPIELWTGKQ
LFSVLLRPNANVRVYVNLIVREKIYSKPKKGDKREKETMCPNDGFVYIRNSELISGQLGK
ATLGNGNKDGLYSILLRDYNPHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDG
KGKTISNGYQQCDKLIEQYNEGKLLLKPGCDATQTLESEITEKLNKLREEAGDVCMKELH
WRNSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKG
FVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRN
ASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREEDYLSPLDISDVVEN
LLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTGGIRGNSK
IIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFH
FAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKGRIQKTVLGQVA
KSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKVLDTRKL
EVIPLGDRERVHFELHNLKNLLPSIIVQGIKTVERAVIAQKKHDGKANDQELPTYNMLVE
GMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHGMSIDIRHMM
LLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDKIEGVSECII
MGIPMQIGTGILKVQQRVDPPPVLNYGSDSIIS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaacacagcaaaaacagcaagacatagtctatactaagcagccttacattgaa
gatgcgggacctcgcagaatcaaaagtatgcaatttacaatgatgtcaggagcagagatt
ttaaaagcagcagaatgccaagttcatttaggttcttattatgattccactcgtaaacct
attcaagccggtttattggatccccgcttgggtcctgcaactaaacagagtagtgcctgt
gaaacttgcggcgcggactttcatgagtgtcctggacattttggatacttgaatcttgtt
ttgccagtgtttaatgttggatatatgagtaacattttggatattttgaagtgtatttgc
aagtcctgttctcgtatactttacgatgagaaattatgtaaagctgacttgaaaaagatg
agaaatcccaggatagagcatctgaggaagagtgagttggtgaagaagattgtgaaaaag
tgcagtagcatgacaagcaataaagctgtgaagtgcacgagatgtggagatatgaatggg
atggtcaagaaggctggttctgttctaagcattattcatgatcgggcaaaattagttgat
ggctatttggaagaatgcagatcagcaattgcacatactaaagagtctagagcacccatt
agtctggctacttatattcttacccctgtcaaagttctctctctttttaaaagaattcca
gaggaggactgcgaagtgcttggtctgtatgatagacctgagaaactcatcataacaaac
attgccgtgccgcctatatcaattcgaccttctgttttcacagatggattacagagtaat
gaaaatgacatcacagagagattaaaacaaattattcaggcaaatgctagccttcgcatg
gagttactagaaggaagaatgagtgtgaacaaatatctggattcttgggatggtcttcaa
gctgcagttgcactctatatgaatagtgatgttcgtgttccaaataacgtggaagttggc
aagccattgagtggttttgtacagcgcctcaaaggaaagcagggacgttttcgtgggaac
ttatcagggaagcgtgttgaatttactggcagaactgttatatcaccagaccctaatctt
aaaattactgaggtggcaattcctatccatatggctcggattttatcttatcctgaacgt
gtttcccatcacaatattgagaagttgaggcagcttgtcagtaacggccctcagaaatac
cctggcgcaagtacggtcagatatcctgacggttcttcaaagcgtttgataggtagttac
agaaaaaccattgctgaggaattgacatttggttgtatagttgatcgtcatttagaagat
ggagatgttgttctttttaacagacaaccaagcttgcatcgaatgtctatcatgtgccat
agggcaagaatcatgccttggagaacattgagatttaatgaatctgtttgcaacccatat
aatgctgattttgatggtgatgagatgaatatgcatgtcccacaaacagaagaggctcga
acagaggcacttttgctgatgggggttcaaaacaatttatgcacaccaaaaaatggagag
atcttggttgcttccacacaagattttctaacatcatcctttttaattacaaggagggac
actttttatgaccgtgcggctttctcacttatgtgttcttatatgaatgatggcatggat
cttattgatttgccaacacctgcaatacttaagccgatagaactttggactggtaaacaa
ttattcagtgttctacttcgtccaaatgcaaatgtgagagtctacgtaaatcttattgtt
agggagaaaatttactccaagcctaagaaaggagataagagagaaaaagaaacaatgtgt
cctaatgatggttttgtttatatccggaacagtgagctaatatctggacaactggggaag
gctactctaggaaatggcaacaaggatggactttactctattcttctcagagactacaat
ccacatgctgctgccacttgcatgaatcggctagctaaattaagtgctcgatggatagga
aatcatggcttctcaattgggattgatgatgtccagccaggaaagaaattgattgatgga
aaagggaagacaatttctaatggttatcaacaatgtgataaactaattgaacaatataat
gaaggaaagcttttgcttaagcctggttgtgatgccactcaaacactggaatctgaaata
actgagaaattaaataagcttcgagaagaagctggtgatgtatgcatgaaagaattgcat
tggagaaacagtccattgatcatgtcacagtgtggatctaaaggatctgttatcaatatc
agccagatggttgcttgtgttggtcagcaatcagttgggggtcgccgtgctccagatgga
ttcatagatcgaagccttcctcacttccccagaaaatcaaaaactcctgcggctaaaggc
tttgttgctaattcattctatagtggtttgatggcaactgaatttttcttccatacaatg
gctgggagagaaggtcttgtggacactgcggtcaaaacagctgacactggatacatgtct
cgtagacttataaaaggattggaagacttatctatccaatatgataatacagtacggaat
gctagtggatgcatagttcaatttctttatggagatgatggcttggatcctgcaagtatg
gaagggaagggtggagttccattgaatcttgaccggttgttctcaaaagtgaaggccact
tgtcctgttagagaagaggattacctatctcctttggatatttctgacgtggtggaaaat
ttgctactaaagcatgatatggctcttggtggaatttgttctgaagcctttaaaaaaagt
ctgacttcctttctcggaagtcatgccaagagattggaaagcatgatgaaattggccgat
ggtgttgaggacccaacctctgagaatatacaaactggagggataagaggaaattctaag
atcatagaaagactggctcacaaaatatttggtgtttctgaaagacagatagaggttttt
gtaaaaacatgcatcaatcgttatctttggaaaagagttgaacctggaactgccattggt
gcaattggagctcaaagtataggggagccagggacgcagatgacattgaagacctttcac
tttgctggagttgcaagcatgaatataacacaaggagttcctcgcatcaaagaaataata
aatggggctaagaagattagtacacctatcattactgcagagcttgagcagaatactaat
gtgactgctgctcgaatagcaaaaggtcggatccaaaaaactgttctgggccaggttgct
aagagtatcaaaattgtaatgacttcgagatcagcatctgtagtgatcacacttgacatg
aaaacaattcaaaatgcacaattatctcttgatgctaacattgtgaaggaagcaatttta
cgaactccaagaattaaactaaagccacagcatatcaaagttctggatactagaaagttg
gaagttattcctctgggtgacagggagagggttcattttgagctccataatcttaaaaat
ttgttgccatcaatcatagttcagggcataaaaactgttgaacgtgctgtcatagcccag
aaaaagcatgatggtaaagcaaatgatcaagagctcccaacatacaacatgttggtagaa
gggatgggtcttgatcttgttatgggaactgaaggagtggatgggtgcaaaacaacgagt
aatcatgtaatggaagttcagaaatttcttggaattgaggctgcaagaaagtgcataatt
gatgagataaatcagaccatggaacatcatggaatgagcattgacatacggcatatgatg
cttttaggagatctaatgacatttaagggcgaagttcttggaatcacaagatttggcatt
caaaaaatggacaaaagtgttttgatgttggcttcatttgagaaaacagcagatcacctt
tatcatgctgctgtttttggaagggatgacaagattgagggagttagtgaatgtatcata
atgggcatcccaatgcagataggcacaggaatactcaaagtacaacaaagggttgatcca
ccaccagtgctgaattatggatcagactctatcatctcttaa
DBGET
integrated database retrieval system
