KEGG   Ricinus communis (castor bean): 8274351
Entry
8274351           CDS       T01087                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8274351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcu03041]
    8274351
Spliceosome [BR:rcu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    8274351
 Complex B
    8274351
 Complex C
   U2 SnRNP specific factors
    8274351
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 8274351
NCBI-ProteinID: XP_048228906
LinkDB
Position
4:30992553..30997299
AA seq 510 aa
MSSTLLEVTRATHEEVERLERLIVKDLQNEPTSNKDRLFQSHRVRNMIDDIISKSHKLVE
IYEDKDNSRKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARGVVDANEDHEAS
LKEEPAVDFTGEEAFGKYLDMHELYNQYINSKFGEPIEYSAYLDIFPQLHNIPRKLKLNR
QYMEYMENLLQYLISFFQRTEPLQDLDRIFSKVVSEFEEQWEIGKLQGWERDVHENGEVP
AQHSVIDLDYYSTIEELMDVGPQKLKEALAALGLKTGGTIQQRAERLFLTKHTPLENLDK
KHFLRGSRGTEQNGGAAASREAENSKEIALTEAKITRLCDLLDETIVRTKENIVKKQALT
YDEMEAEREEEETQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKW
RPDLEEEYEDREGNIYNKKTYTDLQRQGLI
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgctattggaggtaacacgggcgactcatgaggaggtggagaggctagaa
cgattgatagtgaaggatctccagaatgagccaacgtcaaacaaggaccgtctctttcaa
agccaccgtgttcgtaacatgatcgacgatatcatctctaagtcacacaaactcgttgag
atttatgaggataaggataattcaagaaaagatgagattgctgcgcttggtggccaaaca
gctacaggaacgaacgtgtttagtgcgttttatgatagactgaaagagatacgtgagtac
catagaaggcatccggctgcacgtggtgttgttgatgctaacgaggatcatgaggcatct
cttaaagaggaacctgctgttgattttactggcgaggaagcatttgggaaatatctggac
atgcatgagttatacaaccagtacatcaattctaaatttggggagcctattgagtactct
gcttaccttgatatttttccccaactgcataatatccctcgtaagctgaaattgaatagg
caatacatggaatatatggagaacttgcttcagtatttaatctcttttttccagcggaca
gagcccttgcaagatcttgataggatattctcaaaggtggtaagtgaatttgaagagcag
tgggaaattggcaaattgcaaggatgggagagggatgtccatgaaaatggcgaagttcca
gctcagcattctgtgattgatctcgattattacagcacaattgaagaactgatggatgta
ggtcctcaaaaattaaaggaggcattggctgcattaggactaaagactggtggtacaatt
cagcagcgtgcagaaaggcttttcctgacaaagcacacacctcttgaaaatttggacaag
aaacactttctgagaggttcacgtgggacagaacagaatggaggtgcagctgcctcgaga
gaagctgaaaattcaaaagaaattgccttgacggaggccaaaataactaggctgtgtgat
ttactggatgagacaattgtacgaacaaaagagaatattgttaagaagcaggctttgaca
tatgatgaaatggaagcagaacgtgaggaggaagagacacaagctgacactgaaagtgat
gatgaagaacaacagatttacaatccgctcaagttaccgatgggttgggatggaaagcct
ataccttactggctgtataaacttcatggtcttggtcaggaattcaagtgtgagatatgt
gggaattacagttactgggggcgcagggcttttgagcggcatttcaaggagtggaggcat
caacatgggatgcgttgtcttggcattccgaacaccaagaatttcaacgagatcacatca
attgaggaagcaaaagaattatggaaaagaatacaagagcggcaaggagtgaacaagtgg
cgaccagatcttgaagaggagtatgaagacagagaggggaatatttacaacaaaaagaca
tacactgatctgcagcgccagggattgatctaa

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