Ricinus communis (castor bean): 8274388
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Entry
8274388 CDS
T01087
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
8274388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8274388
Transcription factors [BR:
rcu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
8274388
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
8274388
NCBI-ProteinID:
XP_002513589
UniProt:
B9RIM0
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Position
4:30792243..30795380
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AA seq
336 aa
AA seq
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MSDSVSDFFEEHEFGDNTLDGEDLFAIFETLDSVTQFPPVTPSNEVVVISKDGGEETTRL
VSQKSTSSSAILESETELETSPKNKRQKTGIASSEEINPDGQQRMSHITVERNRRKQMNE
HLSVLRSLMPCFYVKRGDQASIIGGVVNYINELQQVLQALEAKKQRKVYSEVLSPRIASS
PRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYRPRLQQQGYLSPTVASSLEPSPTTSSSS
SINDNINELVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQATKIISALEELSLEILHVN
VSTVDETMLNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagtgtgtctgatttttttgaagaacatgaatttggcgacaataccttggat
ggagaagatctttttgccatttttgagaccctagacagcgtaacccagttccctccagtt
acaccatcgaatgaagttgttgttatctctaaagatggtggtgaagaaacgacaaggctt
gtgtcccagaagtccacatcttctagtgctatactagagtctgagactgagcttgaaact
tcaccgaagaacaagagacaaaagacggggatagcttcttcagaagaaataaacccagat
ggacagcaacgtatgtctcatattacagttgaacggaaccgcaggaagcaaatgaacgag
catttgtcagtgttaagatcacttatgccttgtttctatgtcaagagaggagaccaagca
tcaataattggaggtgtcgttaattacatcaacgaattgcagcaagttctacaagccctt
gaagccaagaaacaaagaaaagtttacagtgaagttcttagccctagaatagcgtcgagt
ccaagaccttcaccacttagccctagaaaacccccattgagtccaagacttaacttacct
ataagcccaagaaccccacaacctggtagcccttatagacctaggttacagcagcagggt
tatctctccccaaccgtggctagttcacttgaaccatctccaactacttcttcctcttct
tccattaatgataatatcaatgaactagtcgcaaattcaaaatctgccattgccgatgtt
gaggttaagttctccggcccaaaccttctattgaaaacagtatctccaaggattcctggc
caagctaccaagataatttctgcccttgaagaactctctcttgagatcctccatgtcaac
gttagcactgtagatgagaccatgcttaattcctttaccatcaagattggaatcgaatgc
caacttagtgcagaggaacttgctcaacaaatccagcaaacgttctgctaa
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