Ricinus communis (castor bean): 8276096
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Entry
8276096 CDS
T01087
Name
(RefSeq) DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8276096
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
8276096
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
8276096
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
8276096
NCBI-ProteinID:
XP_048230158
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All DBs
Position
5:10194683..10204660
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AA seq
1034 aa
AA seq
DB search
MSSTKPSLLSPKNFDLFVHFDSKLSVSSLSSSKSSTIMWRNVAKQTISRAQSKSLSSHPL
SSTYSFLGLSQEPSFTDKCKLSPLYACSSLVGFCRLGEIVPYEDFMGKPGFGLVGNKDNS
NSSHMSMCNGYLCSGFYPRGYVSVAEAVSSSTDVEEDVSVVEEVQELLQEMRREEAREKE
LIRRKERGMGSKKYQMLKKRQVKIETEAWEWAVKEYKELLMDMCEKKLAPNLPYMKSLFL
GWFEPFRDAILKEQELIRVGKNRTAFAPYFDQLPADMMAVITMHKLVALVMTGGEHGCAR
VVAAACLIGAAIEQEVRIHKFLEKTKKRNSNDSKKNEEDESNGAVKEQEKLRKKVTDLIK
KQKLPAVRQIVKGHDDSQSWTQDTKAKVGSRLIELLIQTAYIQPPADQLADGPPDIRPAF
AHTFRNVTQADRKTSRRYGVIQCDPLILKGIEKNARHMVIPYMPMLVPPLKWRGYDKGAH
LFLPSYVMRTHGARQQREAVKITPREQLQPVFEALDTLGSTKWRINKRILGVVDRIWNSG
GRLGDLVDRNDVPLPEKPETEDEALVRKWKWKLRAAKKENRERHSQRCDTELKLAVARKM
KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANL
FAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDLTEALRS
SSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAVRVLDIM
RKDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIA
DDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLGLPVVQ
PYRNFGRHLIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVTCKRAGL
NFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPLPERGD
FDLQDVLKSPYFFN
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaccaaaccctctttactttctccaaagaatttcgatctttttgttcacttt
gattcaaaactctcagtttcctctctaagctcatcaaaatcatccactattatgtggaga
aacgtagccaaacaaaccatttcaagagctcaatcaaaatccctcagttcccatcctctt
tctagcacttacagctttcttggactttcccaagaaccatcttttactgataaatgtaag
ttgagtccattatatgcgtgtagttctcttgtgggtttttgccgacttggtgaaattgtg
ccttacgaggattttatgggcaaacccggttttgggttagtagggaataaggataatagt
aatagttctcatatgtctatgtgtaacggatatttgtgtagtggcttttatcctagaggg
tatgtaagtgtcgctgaggctgtttcatcttcaactgacgttgaagaggatgtttctgta
gttgaagaagtgcaagaattgttgcaagaaatgaggagagaagaggcaagagagaaagaa
ttgataaggaggaaggaaagaggaatggggtcaaagaagtatcagatgttgaagaaaagg
caggtaaaaatcgagactgaagcatgggaatgggcggtgaaagagtataaggagcttttg
atggatatgtgtgagaaaaagctggctccaaatttaccttacatgaagtctttgtttctt
ggctggtttgagcctttccgagatgctattctgaaagagcaagagttgatcagagtgggg
aagaatagaacagcttttgctccgtattttgatcagttgcctgctgatatgatggctgtt
attacaatgcataagctggtggcgctggtaatgacaggtggggaacatggatgtgcaagg
gttgtggctgctgcctgtttaattggtgctgcaattgagcaggaggtcagaatacacaag
ttcctggagaaaacgaagaagagaaactctaatgacagtaagaaaaatgaagaagatgaa
tctaatggtgcagtcaaggagcaagagaagctaagaaaaaaagttactgatttgattaag
aaacaaaagttgcctgcagtgaggcagatagtgaaggggcatgatgattcacaatcctgg
acccaggataccaaggctaaggttgggagtcgtttaattgagttgctgatacaaacagct
tatatacagcctcctgctgatcagttagctgatggtccacctgacattcgacccgcattt
gcacacacattcagaaatgtgacgcaagcagataggaagaccagccgaagatatggtgtc
attcagtgcgacccactgattctgaaaggcattgagaaaaatgcaaggcacatggtgatt
ccttatatgccaatgttggtgccaccgctgaagtggaggggttatgataagggagcacac
ttgttcttgccatcatatgtcatgcgtacgcatggcgctagacaacaacgtgaggcggtt
aagatcacccctagggagcagctacagccagtttttgaggctcttgatacattgggaagt
acaaaatggaggataaataaaaggatacttggtgttgtagatagaatatggaacagcgga
ggtcgtcttggggatttggtggacagaaatgatgttcctttaccagagaagccagagacg
gaagatgaagcattggtgaggaaatggaagtggaaactcagagctgcgaaaaaggaaaat
agggagagacactcacagcgttgtgatacagaacttaaacttgctgtagcacgaaaaatg
aaggatgaagaaggtttttattatccacacaaccttgactttcgagggcgtgcatatccc
atgcacccgtacttgaaccatcttggttcagatttgtgtcgaggcattttggaatttgcc
gagggacgccctcttggaaagtcaggcttacgctggttgaagatacacctcgcaaatcta
tttgctggtggtgtggacaaattatcttatgatggtcgaatagcttttacagagaaccat
ttggatgatatatttgattctgcagacagaccacttgagggaaagcggtggtggttgaat
gcagaagatccatttcagtgcttggctgtgtgcattgatctcactgaagctctgagaagt
tcctctccggaaacatttatttcacatgttccaattcaccaggatggttcttgcaatggc
ctacaacactatgctgctctaggaagagacaagttgggagcagctgctgttaatctggtt
gctggagagaagcctgcggatgtctactcaggaatagctgttagagtacttgatatcatg
cggaaggatgcacagaaagatcctaaagttttccctgatgctttacatgcaaagatattg
attagtcaggtggacaggaaattggtgaagcagacagtaatgacgtctgtatatggtgtc
acttacattggtgcaagagatcaaattaagagaaggttgaaagagcgtggtttcattgca
gatgatacagaaatctttgttgcttcttgctatgcggcaaaggtgactttaactgcctta
ggagagatgtttgaagctgcacgaagtatcatgagctggcttggtgaatgtgcaaagatt
attgcatctgaaaatgaaccagtgagatggacaacgccacttggacttcctgttgtacaa
ccttatcgaaacttcggaaggcatcttataaaaacttctctacaggttctaacacttcaa
caagaaactgaaaaggtcatggtcaagcgacagagaacagctttcccaccaaattttgtt
cactcccttgatggctctcatatgatgatgactgcagtcacctgcaaaagggctggcttg
aactttgcaggtgttcatgattcatattggacgcatgcgtgtgatgtggataaaatgaac
aggatacttagggaaaagttcgttgagctttacgaaacaccagtactggagaatttgttg
gagagctttcagcaatcttttcccacattgtcttttccgcctctacccgaacgaggagat
tttgatctacaggatgtgctgaaatcgccatatttcttcaactga
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