Ricinus communis (castor bean): 8280369
Help
Entry
8280369 CDS
T01087
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8280369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8280369
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8280369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
ANAPC4_WD40
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_2nd
Tricorn_2nd
eIF2A
WDR55
Beta-prop_TEP1_2nd
PD40
WD40_MABP1-WDR62_1st
Lactonase
Motif
Other DBs
NCBI-GeneID:
8280369
NCBI-ProteinID:
XP_002527374
LinkDB
All DBs
Position
10:complement(24980948..24993647)
Genome browser
AA seq
442 aa
AA seq
DB search
MPSFPQPGSVTICEINRDLVTAESISDDRAKYTYGKILGMVFSPIQFQADPVAVPSGEQE
TLEQGTPNSLFKALQVFANDSIRRVFYPNNVNLLPEVDFKGVSWHQHKHIIAFISSPNQV
IIRDYEEPEGKDACILSCDSQREIKVLEWRPNGGKSLSVACKGGICIWSASCPGNAASVR
SVAASSLGTLSRGSGNRWTLVDFLRGHNDEQISALSWSPDGRYLASASYESSSFTIWDVA
QGLGTPVRRGLGGISMLKWSPTGDYFFTAKFDGTFYLWETNTWTSEPWSSTSGFVTGATW
DPDGRMVLIAFSGSATLGSIHFSSKPPSLDAHLLPVDLPEIVSLTGSQGIEKIAWDASGE
RLAVSYKGGDDVYRGLIAIYDARRTPLISTSLIGFIRGPGDDPKPIAFSFHDKFKQGPLL
SVCWSSGFCCTYPLIFHSHILA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccttctttcccacagcctggatcagtcactatctgcgaaataaacagagatctagtt
acagctgagagtatctccgacgatcgagccaagtacacttatggaaaaatcctgggaatg
gtgttcagtcccattcaatttcaagcagatccagtggcagtccctagtggagagcaggag
acactagaacaaggaactcccaacagtttgtttaaagcgctgcaagtctttgctaatgat
tctattagacgcgttttttatcccaataatgtaaacttgttgccagaggttgattttaaa
ggggtgagctggcaccaacataaacatattattgcatttatctctagcccaaatcaggtt
ataattcgtgattatgaagaaccagaagggaaggatgcatgcatcttatcttgtgactcc
caaagagaaatcaaagttcttgagtggaggccaaatggtggaaagtcgctttcagtagca
tgcaagggtggaatctgcatctggtcagcatcgtgtcctggaaatgcagcatctgtgaga
tctgttgctgcttcatccttgggaactctttctagaggctctggaaatcggtggactcta
gtggattttcttcggggtcataatgatgaacaaataagtgcactctcttggagtcctgat
ggaagatacttggcatctgcttcatatgaaagttcttcatttaccatatgggatgttgca
caaggattgggtacacctgttcgacggggtttagggggcatatcaatgctcaaatggtca
cctactggagattatttttttactgcaaagtttgatgggacattttacctttgggaaaca
aacacatggacatccgaaccatggtcttcaaccagtggctttgtcacaggagctacatgg
gatccagatggacgtatggttctgattgctttctctggatctgcaacgctgggttcaatt
cacttttcatcaaaacctccatctttggatgcgcacctgttaccagttgatctgccagag
atagtatccctgacaggcagtcaaggaattgagaaaatagcctgggatgcttcaggtgaa
agattagctgtatcatataaaggaggagatgatgtctacaggggtctcatcgctatatat
gacgccagaaggactcccctgatttctacatcattaattggatttattagagggcctgga
gatgatccaaagccaattgcattttcatttcatgacaaattcaaacagggaccattgctt
tctgtctgttggagcagtgggttttgctgtacctaccctctcatatttcattctcacatt
cttgcctag
DBGET
integrated database retrieval system