KEGG   Ricinus communis (castor bean): 8280369
Entry
8280369           CDS       T01087                                 
Name
(RefSeq) aladin isoform X1
  KO
K14320  aladin
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    8280369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8280369
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     8280369
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_THOC3 ANAPC4_WD40 WD40 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_2nd Tricorn_2nd eIF2A WDR55 Beta-prop_TEP1_2nd PD40 WD40_MABP1-WDR62_1st Lactonase
Other DBs
NCBI-GeneID: 8280369
NCBI-ProteinID: XP_002527374
LinkDB
Position
10:complement(24980948..24993647)
AA seq 442 aa
MPSFPQPGSVTICEINRDLVTAESISDDRAKYTYGKILGMVFSPIQFQADPVAVPSGEQE
TLEQGTPNSLFKALQVFANDSIRRVFYPNNVNLLPEVDFKGVSWHQHKHIIAFISSPNQV
IIRDYEEPEGKDACILSCDSQREIKVLEWRPNGGKSLSVACKGGICIWSASCPGNAASVR
SVAASSLGTLSRGSGNRWTLVDFLRGHNDEQISALSWSPDGRYLASASYESSSFTIWDVA
QGLGTPVRRGLGGISMLKWSPTGDYFFTAKFDGTFYLWETNTWTSEPWSSTSGFVTGATW
DPDGRMVLIAFSGSATLGSIHFSSKPPSLDAHLLPVDLPEIVSLTGSQGIEKIAWDASGE
RLAVSYKGGDDVYRGLIAIYDARRTPLISTSLIGFIRGPGDDPKPIAFSFHDKFKQGPLL
SVCWSSGFCCTYPLIFHSHILA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgccttctttcccacagcctggatcagtcactatctgcgaaataaacagagatctagtt
acagctgagagtatctccgacgatcgagccaagtacacttatggaaaaatcctgggaatg
gtgttcagtcccattcaatttcaagcagatccagtggcagtccctagtggagagcaggag
acactagaacaaggaactcccaacagtttgtttaaagcgctgcaagtctttgctaatgat
tctattagacgcgttttttatcccaataatgtaaacttgttgccagaggttgattttaaa
ggggtgagctggcaccaacataaacatattattgcatttatctctagcccaaatcaggtt
ataattcgtgattatgaagaaccagaagggaaggatgcatgcatcttatcttgtgactcc
caaagagaaatcaaagttcttgagtggaggccaaatggtggaaagtcgctttcagtagca
tgcaagggtggaatctgcatctggtcagcatcgtgtcctggaaatgcagcatctgtgaga
tctgttgctgcttcatccttgggaactctttctagaggctctggaaatcggtggactcta
gtggattttcttcggggtcataatgatgaacaaataagtgcactctcttggagtcctgat
ggaagatacttggcatctgcttcatatgaaagttcttcatttaccatatgggatgttgca
caaggattgggtacacctgttcgacggggtttagggggcatatcaatgctcaaatggtca
cctactggagattatttttttactgcaaagtttgatgggacattttacctttgggaaaca
aacacatggacatccgaaccatggtcttcaaccagtggctttgtcacaggagctacatgg
gatccagatggacgtatggttctgattgctttctctggatctgcaacgctgggttcaatt
cacttttcatcaaaacctccatctttggatgcgcacctgttaccagttgatctgccagag
atagtatccctgacaggcagtcaaggaattgagaaaatagcctgggatgcttcaggtgaa
agattagctgtatcatataaaggaggagatgatgtctacaggggtctcatcgctatatat
gacgccagaaggactcccctgatttctacatcattaattggatttattagagggcctgga
gatgatccaaagccaattgcattttcatttcatgacaaattcaaacagggaccattgctt
tctgtctgttggagcagtgggttttgctgtacctaccctctcatatttcattctcacatt
cttgcctag

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