Ricinus communis (castor bean): 8283826 Help Entry 8283826           CDS       T01087                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL4   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism rcu  Ricinus communis (castor bean) Pathway rcu04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:rcu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     8283826  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rcu04121]     8283826 Enzymes [BR:rcu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      8283826 Ubiquitin system [BR:rcu04121]  Ubiquitin ligases (E3)   HECT type E3    8283826 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT HEAT_2 Motif Other DBs NCBI-GeneID:  8283826 NCBI-ProteinID:  XP_002525185 UniProt:  B9SGR6 LinkDB All DBs Position 10:14326568..14335063 Genome browser AA seq 1561 aa AA seqDB search MGNRGQKRTEVIDELPADKRACSSLEFRPSSSNSSIQTHVNSPNSTPETHEADMDTSSSG SASSHSEEEEHERDSAYGSCDSDDAIPRHSSLRNFQRHRSLGDHGRLRNALSNLSEGTEP SGQLAALTDLCEVLSFCTDDSLSSMMADTLSPVLVRLARHESNPDVMLLAIRALTYLCDA CPRASSYLVRHDAVPVLCERLMAIEYLDVAEQCLQALEKISREQPLPCLQAGAIMAVLSF IDFFSTSVQRVSLSTVVNICKKLPTECPSPFMEAVPTLCNILQYEDRQLVESVVICLMKI AERVSQSSEMMDEFCKHGLIDQAAHLIHLNSRTTLSQPIYNGLIGLLVKLSSGSIVAFRS FHELNISSTLKDILATYDVSHGMSSLHTVDGQSNQVNEVLKLLNELLPQVVKDQDVQQEA SDKESFLVNHPDLLLKFGSDILPMLVQVVNSGANIYVCYGCLSVIKKLVSFSKSDMLVEL LKTANISSFLAGVFTRKDHHVLILALQIAEVILQRFSDVFLNSFIKEGVFFAIDALMTPE KCSHSMFLSCNGIQLPPESSQKLASKAVLKCLCYAFDTGQSPISLETAACKIEKDSVQSL AEHISVTYFAPELCNSENGLTDILQKLRALSASLGDLMNMPVAVDASSQDEEKFDCLLRQ IMETLNGRETVSTFEFIESGIVKSLVNYISNGQYLREKVELHDRRAHYHAVEKRFQVFAR LFSSYSSLAGELPVSVLVRKLQSALSSLENFPVILTHLSKQRNWFATVPNGHCISHPCLK VRFLRGEGETCLSDYSDDAITVDPFSSLDAVEGFLLPRVRIERTKETEIAAQVVDPIESV SFQIPSNVNSGQDEVSGPRQPGSMSTDLPEIKEDEANLSVSSLEQAGNFQKGNPGEKPSS SDTNIVVQFPPGADISRKSQHRSSSSKEYTSPKLAFYLEGKELDRTLTLYQAIIQQKIKA DHEINTGAKLWCRVYTLTYRIAAECKDDNPEECHNLAQNSSVSDMIEASMHCGSFFTSIF NRELASNLDKSSPTYDVLFMLKSLEGLNRFTFHLMSRERIHAFSAGLIDNLDNLEVAVHS VSQNEFVSSKLTEKLEQQMRDSFAAVGGMPLWCSQLMASCPFLFSFEARCKYFRLSAFGT QQIQPESPALNNSGVRTNSGSLPRKKFVVWRDRIMESASQMMDLYAGVKVPIEVVYNEEV GSGLGPTLEFYTLVSHEFQKSGLGIWRDDSSLFADRKDLHTEDAGIVMSPFGLFPCPWSS TLDTSDGIQFSEVIKKFFLMGQLVAKALQDGRVLDLPFSKAFYKLILQQELNLYDIQSFD PGLGKTLIEFQAVVNRKKFLGLALGENSCSNFDAYFRNTRIEDLFLDFTLPGYPDYILHQ DCKMVNMDNLEEYISLVVDATINAGISRQVEAFKSGFNQVFPIKHLQVFTVEELERLLCG EHDFWVYNELFDHIKFDHGYTASSPPITNLLEIMQGFNQEEQRAFLQFVTGAPRLPPGGL ASLNPKLTIVRKHCSNCVDADLPSVMTCANYLKLPPYSSKEKMKEKLLYAITEGQGSFHL S NT seq 4686 nt NT seq  +upstreamnt  +downstreamnt atgggaaatcgtgggcaaaagcggacagaagtgattgatgaattgccggcagataagagg gcttgtagttcattggagtttagaccaagttcgtcgaactcatcaattcaaactcacgtt aattccccaaattccacacctgaaacccatgaagctgatatggatacttcatcctctggt tcagcttcaagccattcagaggaggaggagcatgagagagattcagcttatggatcatgt gattctgatgatgcaataccaagacacagcagtttgcgcaatttccagaggcatagatca ctcggggatcatggcagactgaggaatgctttatccaatttgagcgaggggactgagcct tcagggcaattagctgctcttacagatttgtgtgaggtcctgtcattctgtactgacgat tctctttcaagtatgatggcagacacattatccccagttcttgttcggcttgcaaggcat gagagcaacccagatgttatgttgttggctataagagctttaacttatctatgtgatgca tgtcctcgagcgtctagttatcttgttagacatgatgcagttcctgttctttgtgaaaga ttaatggccattgagtacttagatgtggctgaacagtgcttgcaagcattggagaaaata tctcgggaacagccactgccatgcttacaggctggggcaattatggctgttctaagtttt atagacttcttctccactagtgtacaaagagtctcactttcaacagtggttaatatatgt aagaagctgccaactgaatgcccttctcctttcatggaggctgttccaacattatgcaat attttacaatatgaggatcgacagcttgttgaaagtgttgttatttgcttgatgaaaata gcagagcgagtcagtcagtcttctgaaatgatggatgaattttgtaaacatgggctaatt gatcaagctgcacatctaatacacttgaatagccgaaccactctatcccaaccgatatac aatggtttgattggcctacttgtcaaactttcttctggttcaattgttgctttcaggtct ttccatgagcttaatataagcagcactttgaaggatatattagctacttatgatgtctct catggaatgtcttccctccatacagtagatggccagagcaaccaggtaaatgaagttctg aagttgctaaatgagcttctgcctcaagtagtaaaggatcaagatgttcaacaagaagcg tcagataaagaatcatttttagttaatcaccctgatcttttgctcaagtttgggtctgat atactacctatgttggtccaggttgttaattctggtgcaaatatatatgtttgctatggc tgcctatctgttatcaaaaagttggttagtttcagcaaatctgacatgcttgttgaatta cttaagactgcaaacatttcaagtttcttggctggtgtttttacacggaaggatcaccat gtgctaatattggcactgcaaattgctgaggttatattgcagagattctcagatgttttt ttgaactctttcattaaggagggtgtgttttttgccattgatgcccttatgacgccagaa aaatgttcgcattcaatgttcctatcgtgtaatggcatccagctaccacctgagtccagt caaaagcttgcttcaaaggctgtcctaaaatgcttatgctatgcatttgatactggtcag tctccgatatccttagaaacagcagcatgcaagattgaaaaggatagtgttcaaagtctt gcagagcatataagtgtcacttactttgctccagaactctgcaactctgagaatggattg acagatatccttcaaaagctcagagctctttctgcttcattgggtgatctgatgaatatg cctgtagctgttgatgcttccagccaagatgaggaaaagtttgattgcttattacgtcaa atcatggaaacacttaatggaagagaaactgtttccacttttgaatttattgaaagtgga atcgtgaaatcattagtaaattacatatcaaatggtcaatatctaagagaaaaggtagaa cttcatgataggcgtgcccattatcatgctgtagaaaaaagatttcaggtgtttgctagg ctcttttcgtcttattcaagccttgctggagagttgcctgtgtcagttttagtaagaaaa ttgcaaagtgcattatcttctctggaaaatttccctgttattttgacccatttgtccaag caaagaaactggtttgctactgttcctaatggacattgcatctctcacccatgcctgaaa gttcgtttcttgaggggagaaggggagacatgcctttctgactactctgatgatgctatc actgttgaccctttttcttccttggatgctgttgaaggatttttgttgcctagagttaga atagaaagaaccaaagaaacagaaatagctgcgcaggtggtggatccgattgaaagtgta tcttttcaaattccttcaaatgtgaactctggccaagatgaagtttcaggtcctcggcaa cctggcagcatgtctaccgatttgcctgagataaaggaagatgaggctaatttatcagtg tcatcactggagcaagcaggaaattttcagaagggaaatcctggtgaaaaaccatcttca agtgataccaacattgtagtgcaatttcctcctggggcagacatcagcagaaaaagtcaa catcgttcatcctctagcaaagaatatacttcaccaaaattggcattttatctagaagga aaagagttggaccggactttgacattgtatcaggcgattatccagcagaaaattaaggct gaccatgaaattaatactggagcaaagctgtggtgtcgagtgtacacactcacctataga atagctgctgaatgtaaagatgataatcctgaagaatgtcataatttagctcaaaattcc tctgtctcggatatgattgaggcttctatgcactgcggttcttttttcaccagcatattt aatcgtgaacttgcttcgaacttggataagtcaagtcctacttatgatgtattattcatg cttaaaagtttagaaggcttgaacaggtttacatttcacctaatgtctcgtgaaagaata catgcattttctgcggggctaattgataacttggataatttagaagtagcagttcattca gtctcacagaatgagtttgtgagcagtaagttaacagagaaactggaacagcagatgcga gactcttttgctgccgtaggtggcatgccattgtggtgcagtcagcttatggcttcatgc ccctttttgtttagttttgaggcaagatgtaaatacttccggctgtcagcatttggcact cagcaaattcagccagagtcaccagcgcttaataattcaggagttcggaccaattcaggc agtctgccacgtaagaagtttgttgtttggcgtgaccggattatggagtctgcttcccag atgatggacctttatgctggtgttaaagtgcccattgaagtggtatacaatgaagaagtt ggaagtggtcttggtccaacactggaattttataccctggtcagtcatgagtttcagaag tctggccttggcatatggagagatgatagtagtttatttgcagaccggaaagatttacat accgaggatgctggaattgtgatgtctccttttggcctttttccttgcccctggtcatca acattagatacatctgatggaatacagttttctgaagttataaagaagtttttcctaatg ggtcaactggtagcaaaggctcttcaagatggaagagtcttggatctgccattctccaaa gccttctataagctcattcttcagcaggaacttaatctgtacgacattcagtcattcgat cctgggctgggaaagacactgatagagtttcaggctgtggttaataggaaaaagtttttg ggattagctttaggagaaaactcatgttctaactttgatgcatactttcggaataccaga attgaggatctctttcttgactttactcttcctgggtatcctgattacattctacaccaa gattgcaaaatggtaaatatggataatttagaagagtatatttctctggttgtggatgct actataaatgctggaatttccagacaagttgaagctttcaagtcgggatttaatcaggtt tttccaattaagcatcttcaggttttcactgtggaagaactggagcgattgctatgtggc gaacatgatttttgggtttataatgagcttttcgatcatatcaagtttgatcatggatac actgctagcagtcctcctatcactaatttactggaaatcatgcaagggtttaatcaagaa gagcagcgagcatttctgcaatttgtaactggggcacctcggcttcctccaggaggtctg gcatctttgaatccaaaattgacaattgtccggaagcattgtagcaactgcgtggatgca gacctacctagcgtgatgacctgtgccaattatctgaagttgccaccttactcttcaaaa gaaaaaatgaaagagaagcttttatatgccataacagaaggacaaggctcattccacctt tcatag

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