Ricinus communis (castor bean): 8287012
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Entry
8287012 CDS
T01087
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8287012
Enzymes [BR:
rcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
8287012
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
8287012
NCBI-ProteinID:
XP_002520133
UniProt:
B9S2B4
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Position
1:complement(4595030..4597729)
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AA seq
440 aa
AA seq
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MVIMNKSLFTFVLFASFAVIFPTLHANIGDFDEYWKQKADIAREAAYRSYNPNPFNVSNQ
LNYQVNKAVSGTNSTRRNLMRRKGGGPCKATNPIDRCWRCDPKWALNRKRLVECVLGFGH
STTGGKDGKFYIVTDPSDNDMVNPKPGTLRHAVIQNEPLWIIFARSMIIRLNQELMISSN
KTIDARGANVHIAGGAGLTLQFVQNVIIHGIRIHDIVSGSGGLVRDSVDHYGFRTKSDGD
GISIFGSSNIWIDHVSMSNCQDGLIDAIMGSTSITISNCHFTNHNEVMLFGASDGYSADT
IMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSRKPTIISQGNRFIAP
NNIFSKEVTKREYSLESEWKNWNWRSDRDLMMNGAVFVESGKPITHDFSRLQLIKAKPGT
FVTRLTRYSGALDCFVGKPC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggtgataatgaacaaaagtttatttacgttcgttctttttgcttcttttgctgtgatt
ttcccgactttgcatgccaatataggggattttgatgagtactggaagcaaaaagcggat
attgcccgtgaagccgcctatcggtcttataatcccaatccttttaatgtctccaaccag
cttaattatcaagttaacaaggctgtatcgggtaccaacagcacgagaaggaatttgatg
aggagaaaaggtggcggtccatgcaaagcaactaatcctatagatagatgctggcggtgt
gaccccaaatgggcgttgaacagaaagaggctagtcgagtgtgtcctcggctttggccat
agcacaactggcgggaaggacggaaagttttatattgtcactgatccttcagacaatgac
atggttaaccctaaacccggaaccctacgccatgcagtgatccagaatgaacctctttgg
attatttttgcacgtagtatgattattagactcaatcaagaactcatgatttcaagcaac
aaaaccattgatgctagaggagctaatgtacatattgctggtggtgctggtcttactctg
cagttcgttcagaatgtgatcatccatggtattcggattcatgacattgtttcaggctcc
ggtggccttgttagagattctgtagatcattacggattcaggactaaaagtgatggtgat
gggatttccatatttgggtcctctaatatttggattgatcatgtttctatgtccaactgt
caggatggtctaattgatgctattatggggtcaacttctattaccatctccaattgccac
ttcacaaatcacaatgaggtgatgttgttcggtgcaagcgatggctattcggctgatact
ataatgcaaatcacagttgcattcaaccactttggtagaggtttggtacagagaatgcct
aggtgcagatggggtttctttcatgttgtcaacaatgactacactcattggcttatgtat
gccatcggtggtagccgcaaacccacgatcatcagccaaggcaaccgatttattgctccc
aataatatcttttccaaggaggtgacgaagagggaatactcattggaaagcgagtggaag
aactggaattggagatcagacagagatctgatgatgaatggagctgtttttgttgaatct
ggaaaaccgattacacatgacttctcaaggctacaattgatcaaggcaaagccaggaaca
tttgtaacaagactcactcgctactctggtgctctcgactgctttgttggaaagccttgt
tag
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