KEGG   Roseobacter denitrificans: RD1_1338
Entry
RD1_1338          CDS       T00376                                 
Symbol
def
Name
(GenBank) peptide deformylase, putative
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    RD1_1338 (def)
Enzymes [BR:rde01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     RD1_1338 (def)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-ProteinID: ABG30980
RoseoBase: RD1_1338
UniProt: Q16AL3
LinkDB
Position
1287913..1288410
AA seq 165 aa
MSVRAYLKWPDARLRTAAADVAEITPEVLGIWDDMIDTMDAMPGVGLAAPQIGVMLRLAV
VDASDTRDRRIRLANPEIIEASAIMNDHEEASPNLPGVFAKIRRPRGVTVRFMDETGTYV
QRDFVGLEATSVQHQIDHLQGKMYFDNLSKVKRDMLLRKARKLNG
NT seq 498 nt   +upstreamnt  +downstreamnt
atgagcgtacgcgcttaccttaaatggccagacgcgcggctgcgcactgccgccgccgat
gtagcggagatcacgccggaggtgctgggcatctgggatgatatgatcgacacgatggat
gccatgccgggggtggggctggcggcgccgcagatcggcgtgatgttgcggctggccgtc
gtggatgcatcagacacgcgcgaccggcgcattcgtctcgccaatccggagattatcgag
gcgtctgccatcatgaatgatcatgaagaggcgagtccgaatttacccggtgtatttgcc
aaaatccggcgtccgcgcggcgtgaccgtgcgtttcatggatgaaaccggcacctacgtg
cagcgcgattttgtcgggcttgaggcgacgagcgtgcagcatcagatcgaccatttgcag
ggaaagatgtatttcgacaatctcagcaaggtgaaacgggatatgctgctgcgcaaggcg
cgtaaactgaacggctag

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