Roseobacter denitrificans: RD1_2088
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Entry
RD1_2088 CDS
T00376
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
rde
Roseobacter denitrificans
Pathway
rde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RD1_2088 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rde03400
]
RD1_2088 (ruvC)
Enzymes [BR:
rde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
RD1_2088 (ruvC)
DNA repair and recombination proteins [BR:
rde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RD1_2088 (ruvC)
RecFOR pathway proteins
RD1_2088 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
ABG31689
RoseoBase:
RD1_2088
UniProt:
Q168A4
LinkDB
All DBs
Position
1994802..1995365
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AA seq
187 aa
AA seq
DB search
MFAFRANAYKTNKKSRTASMTRVIGIDPGLRNLGWGVIEVSGSRIAHIANGVCVSGGSDL
ADRLLSLHQQLTAVVSTFAPDEAAVEQTFVNKDGAGTLKLGQARGIAMLVPAQAGLRVGE
YAPNKIKKTVVGVGHADKAQVLHMVRLQLPGAEIKSPDAADALAIAICHAHHGGAAGLGA
AIAKATA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcctttcgtgctaatgcgtacaaaacgaataaaaagagcaggacagcatctatg
acacgggtaatcggcattgatccggggctgcgcaatctgggctggggtgtcattgaagtg
tccggcagccgaatcgcgcatatagccaatggggtttgcgtgtcggggggcagcgatttg
gcagaccgtttgctgtccctccaccagcaactgacggcggtggtttcgacctttgcgccg
gatgaggccgcggtggaacagacattcgtcaacaaggacggggccggaacgctcaagttg
ggtcaggcgcgcgggattgccatgctggtgcccgcgcaggccggtctgcgcgtaggtgaa
tatgcgcccaacaagatcaagaagaccgtggtgggggttgggcatgcggataaggcgcag
gtgctgcatatggtacgcttgcaattgcccggcgcagagatcaaaagcccggatgcggcg
gatgctttggcgattgccatctgtcatgcacatcacgggggggcggctggtttgggcgcg
gcaattgcaaaggcaacggcatga
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