Roseobacter denitrificans: RD1_2598
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Entry
RD1_2598 CDS
T00376
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00540
Lipopolysaccharide biosynthesis
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RD1_2598 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rde01005
]
RD1_2598 (lpxB)
Enzymes [BR:
rde01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
RD1_2598 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
rde01005
]
Lipid A
RD1_2598 (lpxB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-ProteinID:
ABG32149
RoseoBase:
RD1_2598
UniProt:
Q166E4
LinkDB
All DBs
Position
2480896..2482056
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AA seq
386 aa
AA seq
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MKRAFIIAGEPSGDKLGGALMVGLKTLSPGIAFDGVGGPLMQAQGLESRFPMDELSVMGI
TEVLPKYRALKARIRETAQAVIASNPDVLITIDSPDFCFRVAKLVKKSSSIRTVHYVAPT
VWAWRPGRAAKISKFVDHLLALFPFEPAYFTPHGMACDFVGHPVVAEPVATQDEAEAFRA
EHDIGSAPLLMVLPGSRRGEVARLADVFGGAISPVLARHPGLKVVVPAARPVAQQVKEAV
AQWPVAPVVIDPRDMASEDAACAKSAAFRAADIALAASGTVSLELAASRTPMVVAYRMHW
LSYRLIRAMALVDTVTLVNLVSDTRFVPEFLGPDCESSAIGQALIDVLKTPSDQVEAMQI
TMERLGHRGEAPGLRAARAILHRAGV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgggcgtttatcatcgcgggcgagccgtcaggggacaagctgggcggtgcgttg
atggttgggctcaaaacgctgtcgccgggaatcgcatttgatggtgtcggcggacccttg
atgcaggcccaggggctggaaagccgctttcccatggatgagcttagcgtgatggggatt
acagaggttttgccaaaataccgcgccttgaaagcgcgcatacgtgagacggcgcaggcg
gtgatcgcgagtaacccagacgtgcttatcaccatagattcgcctgatttttgttttcgg
gtggccaagctggtgaaaaaatccagcagcatccggacggtgcattatgtggccccgacc
gtctgggcgtggcggcccggccgcgcggccaagatatcgaaatttgttgatcacctgttg
gcgttgtttccattcgaacctgcctatttcacacctcatggcatggcgtgtgatttcgtg
ggccatccggtggtcgccgaacctgtcgcgacacaagatgaggcggaagcgttccgggca
gagcatgacatcggatccgcgccgcttttgatggttttgcctggctcaaggcggggggag
gttgcgcgtctggcggatgttttcgggggtgcgatctcacccgttctggcgcggcacccg
ggactgaaagtggtcgtgcccgccgccagacccgtggcgcagcaggtcaaggaagccgtc
gcacagtggccggtggcgccggttgtgattgatcctcgcgacatggcctcagaagatgca
gcttgtgcgaaaagtgccgcgtttcgtgctgccgatattgcccttgcggcctcgggtacc
gtgtcgctggaactggccgcgtcacgcacgccgatggtcgtggcctaccgcatgcattgg
ctcagctacaggctgatccgcgcgatggctttggtggatacggtgaccttggtcaatctg
gtatcggacacgcgtttcgtgcctgaatttcttggtccggactgtgagagttctgctatc
ggacaggctttgatagatgtgctgaaaaccccgtctgatcaggtggaggccatgcagatt
accatggagcggttgggtcatcggggggaggcacccgggctgcgggccgcccgcgcgatc
cttcatcgagcgggggtgtaa
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