Reichenbachiella agarivorans: N6H18_18565
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Entry
N6H18_18565 CDS
T08483
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rek
Reichenbachiella agarivorans
Pathway
rek02024
Quorum sensing
rek03060
Protein export
rek03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
N6H18_18565 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N6H18_18565 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N6H18_18565 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rek02044
]
N6H18_18565 (ffh)
Enzymes [BR:
rek01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
N6H18_18565 (ffh)
Secretion system [BR:
rek02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
N6H18_18565 (ffh)
Eukaryotic Sec-SRP protein
N6H18_18565 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
AAA_16
nSTAND3
AAA_17
cobW
CbiA
AAA_18
AAA_14
ATP_bind_1
CLP1_P
AAA_30
ParA
NPHP3_N
Helicase_RecD
ResIII
AAA_33
KAP_NTPase
AAA_24
KTI12
DO-GTPase1
AAA_19
NTPase_1
ATPase
TsaE
APS_kinase
ATPase_2
NB-ARC
SLFN-g3_helicase
AAA
YqeC
NACHT
GvpD_P-loop
MMR_HSR1
AAA_28
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
UXP32346
UniProt:
A0ABY6CPA6
LinkDB
All DBs
Position
4461766..4463094
Genome browser
AA seq
442 aa
AA seq
DB search
MFDNLSGKLDKAFKTLKGQGKITEINVATTVKEIRRALIDADVNFKVAKNVTDTIREKAL
GQNVLTAISPGQLLTKIVSDELTLLMGGAKVDISLQGDPNIILISGLQGSGKTTFTGKLA
NHLKSKRNVLLVACDIYRPAAIDQLKVLGEQIGVDVYAEPDNKDALKIAKNAIKYAKENN
KKTVIVDTAGRLAVDEQMMQEIESLKKFLNPAETLFVVDAMTGQDAVNTAKTFNERLNFD
GVVLTKMDGDTRGGAALSIRNVVEKPIKFISHGEKMEALDIFYPERMASRILGMGDVVSL
VEKAQQNFDEEEAKRIQKKIRKNNFGFDDFLSQLEQIKKMGNLKDLMGMIPGVGKAIKDI
DIDDDSLKPIEAIIKSMTIQEREEPDLINGSRKKRIANGSGTSIQEVNQLLKQFDQMRKM
MKTMNKMGGAKRMMSGMNMFGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaagcggcaagctagacaaggcatttaagacattaaaaggacaaggc
aagatcaccgagatcaatgtagccactacagtcaaagaaattagacgtgcactcattgat
gccgatgttaacttcaaagtagccaaaaacgtaaccgatacaattagagaaaaggcattg
ggtcaaaatgtattgaccgccatttccccaggtcaattgttgaccaaaatagtctctgat
gagttgacactactcatgggaggagccaaggtggacatcagtctacagggcgatcccaat
attattttgatctctggtctacaaggttcgggtaaaactacctttactggaaaactagcc
aaccacctcaaaagcaagagaaatgtcctattggtcgcctgcgacatctaccgtcctgcc
gcgatcgaccagttgaaagtccttggagagcaaatcggagtggatgtatatgctgagcca
gacaacaaagacgcactaaagattgccaaaaacgcaatcaagtacgcaaaggaaaataac
aaaaagaccgtcatcgtcgataccgctggtcgtctcgcagtagacgagcaaatgatgcaa
gagattgaatctttaaagaaattcttgaatcctgcagaaacgctcttcgtcgtagatgcc
atgactggacaagatgctgtcaacactgccaagaccttcaacgaacgattgaatttcgat
ggggtagtcttgactaaaatggatggtgacacccgtggtggagctgccctatcgatccga
aatgtggtcgaaaaacctatcaaattcatttctcacggagagaaaatggaggcattggat
atcttctatccagaaagaatggccagcagaatcctcggtatgggggatgtcgtctcgttg
gtagaaaaagcacagcagaactttgacgaagaagaagccaaaagaatccagaagaagatt
cgcaaaaacaatttcggatttgacgatttcctttctcaactagagcaaatcaaaaaaatg
ggtaacctcaaggaccttatgggtatgatcccaggtgtcggcaaggctatcaaagacata
gacattgacgatgattctttgaaacctatcgaagcaatcatcaagtccatgaccatccaa
gaaagagaagagccagacttgatcaacggcagcagaaagaagagaattgccaatggtagt
ggtacctcaatccaagaggtcaaccaactgctcaagcaatttgaccaaatgcgtaaaatg
atgaaaaccatgaacaaaatgggaggagccaaacgcatgatgtctggcatgaacatgttc
ggcaagtaa
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