Rhizobium etli bv. mimosae Mim1: REMIM1_CH01393
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Entry
REMIM1_CH01393 CDS
T02778
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
REMIM1_CH01393 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rel03021
]
REMIM1_CH01393 (rpoZ)
03400 DNA repair and recombination proteins [BR:
rel03400
]
REMIM1_CH01393 (rpoZ)
Enzymes [BR:
rel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
REMIM1_CH01393 (rpoZ)
Transcription machinery [BR:
rel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
REMIM1_CH01393 (rpoZ)
DNA repair and recombination proteins [BR:
rel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
REMIM1_CH01393 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
AGS21225
UniProt:
S5RVC4
LinkDB
All DBs
Position
1417980..1418384
Genome browser
AA seq
134 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLASHRARLISQGASITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPASMIAAGGAAAADSEEQDDLPETITFDQMSEEELLA
GIEGLVPPEKSDDY
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcacagttgaagattgcatcgacaaggtggagaaccgcttcgagctggtt
ctgctcgccagccaccgcgcccggctgatttcccagggcgcctcgatcaccatcgatcgc
gacaacgacaagaatcctgtcgtggcgctgcgcgaaatcgccgacgagacgctttcgccc
gatgacctcaaggaagatctgatccattcgctgcagaaacatgtcgaagtcgacgagccc
gagcccgatcccgccagcatgatcgccgccggtggcgctgctgccgccgacagcgaggag
caggatgacctgccggagacgatcactttcgaccagatgtcggaagaagagctgcttgcc
ggtatcgagggcctcgtgccgccggaaaagagcgacgattattaa
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