Rhizobium etli CFN 42: RHE_CH03954
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Entry
RHE_CH03954 CDS
T00317
Name
(GenBank) hypothetical conserved protein
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ret03016
]
RHE_CH03954
Enzymes [BR:
ret01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
RHE_CH03954
Transfer RNA biogenesis [BR:
ret03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RHE_CH03954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
DAGK_cat
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
ABC92699
RhizoBase:
RHE_CH03954
UniProt:
Q2K387
LinkDB
All DBs
Position
complement(4181356..4182627)
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AA seq
423 aa
AA seq
DB search
MSGIEVITFGCRLNTYESEVMKAQAEKAGLNNAVLVNTCAVTGEAVRQARQAIRRARRDN
PHARIIVTGCAAQTEKETFAAMAEVDAVLGNEEKLSSASYRSLPDFGVSAEEKLRVNDIM
SVKTTAPQMIRHIDGHVRAFIQVQSGCDHRCTFCIIPYGRGNSRSVPMGAVVDQARRLAD
SGYREIVLTGVDATSYGSDLPGTPTLGLLAKTLLKQIPDIRRLRLSSIDSIEADAHLMDL
IAEEPRFMPHLHLSLQHGDDMILKRMKRRHSRADALRFIEDVRRLRPEMSFGADMIAGFP
TETEEMFANAVRLAEEAGIAHLHVFPYSPRPGTPAARMPQLDRSLVKDRAARLRDTGHRL
HQSHLDGMVGTRQWLLVENNGLAHTENFTLVAAADLRPGELVPVTITGHNGKHLDMQLTA
AAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcatcgaggtcattaccttcggctgccgcctcaacacatatgaatccgaagtg
atgaaggcgcaggccgagaaggccgggctcaacaatgccgtcctggtcaatacctgtgcg
gtgaccggtgaggccgtgcgtcaggcccgccaggcgatccgccgggcgcggcgcgacaat
ccgcatgcccgcatcatcgttaccggttgcgccgcgcagactgagaaagagaccttcgcc
gccatggcagaggtcgacgccgtgcttggcaacgaggagaagctttcgagcgcctcctat
cgcagcctgcctgattttggggtttcggccgaagagaagctgcgggtcaacgatatcatg
agcgtgaagacgacggcgccgcagatgatcaggcatatcgatggccatgtgcgcgccttc
attcaggtgcagagtgggtgcgaccatcgctgcaccttctgcatcatcccctacggtcgc
ggcaattcccgctccgtgccgatgggagccgtcgtcgaccaggcccgcaggctcgccgac
agcggttaccgcgagatcgtcctgaccggggtcgacgccaccagctatggcagcgatctg
ccgggaaccccgaccctcgggcttctcgccaagacgctcttgaagcagattccggatatc
cgccgcctcaggctttcctcgatcgacagcatcgaggccgacgcccatctgatggatctc
atcgccgaagaaccgcgcttcatgccgcatctgcatctgtcgctgcagcatggcgacgac
atgatcctcaagcggatgaagcgccggcattcgcgcgccgatgcgctgcgtttcattgag
gacgtacgccgtcttcgcccggagatgagcttcggcgccgatatgatcgccggcttcccc
accgaaaccgaagagatgttcgccaatgccgtgcggctagccgaagaggccggtatcgcg
catctgcacgttttcccctacagcccgcgtcccggcacgccggccgcccgcatgccgcag
ctcgaccggtcgctcgtcaaggatcgagccgcgcggctccgcgacactggacataggctg
catcaatcccatctcgatggcatggtcggaacccggcagtggctgcttgtcgaaaacaac
ggcctggcgcatacggaaaacttcacgctggtcgcggccgccgaccttcgtcccggcgaa
cttgtgccggtgacgatcaccggccacaatggcaagcatctcgacatgcaattgacggcc
gcagcggcctga
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