KEGG   Cupriavidus pinatubonensis JMP134: Reut_A2081
Entry
Reut_A2081        CDS       T00268                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
reu  Cupriavidus pinatubonensis JMP134
Pathway
reu02024  Quorum sensing
reu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:reu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Reut_A2081
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Reut_A2081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:reu03019]
    Reut_A2081
   03036 Chromosome and associated proteins [BR:reu03036]
    Reut_A2081
Messenger RNA biogenesis [BR:reu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Reut_A2081
Chromosome and associated proteins [BR:reu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Reut_A2081
SSDB
Motif
Pfam: Hfq LSM Hfq_1 SRP14
Other DBs
NCBI-ProteinID: AAZ61445
UniProt: Q46ZI8
LinkDB
Position
1:complement(2288440..2288679)
AA seq 79 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFRVDDSAEG
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaactgctacaagacccgttcctgaacgcgctgcgcaaagagcac
gtgccggtttccatctatctggtcaatggcatcaagctgcaaggcaatatcgaatcgttc
gaccaatatgtcgtgctcctgcgtaacaccgtgacgcagatggtctacaagcatgcgatt
tccaccgtcgtcccggctcgcgcggtcaatttccgcgtggatgattccgccgagggctga

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