Rhodococcus fascians D188: A3L23_02267
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Entry
A3L23_02267 CDS
T04328
Symbol
ydiP
Name
(GenBank) putative BsuMI modification methylase subunit YdiP
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rfa
Rhodococcus fascians D188
Pathway
rfa00270
Cysteine and methionine metabolism
rfa01100
Metabolic pathways
Module
rfa_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
A3L23_02267 (ydiP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfa03000
]
A3L23_02267 (ydiP)
03032 DNA replication proteins [BR:
rfa03032
]
A3L23_02267 (ydiP)
03036 Chromosome and associated proteins [BR:
rfa03036
]
A3L23_02267 (ydiP)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rfa02048
]
A3L23_02267 (ydiP)
Enzymes [BR:
rfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
A3L23_02267 (ydiP)
Transcription factors [BR:
rfa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
A3L23_02267 (ydiP)
DNA replication proteins [BR:
rfa03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
A3L23_02267 (ydiP)
Chromosome and associated proteins [BR:
rfa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
A3L23_02267 (ydiP)
Prokaryotic defense system [BR:
rfa02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
A3L23_02267 (ydiP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AMY53609
UniProt:
A0A161GDK7
LinkDB
All DBs
Position
complement(2357174..2358322)
Genome browser
AA seq
382 aa
AA seq
DB search
MVGLFAGIGGLELGLAEAGWTTQLLCEIDPGAGAVLSARMPNVPLHTDVTTLRSLPTGTE
LVAAGFPCQDLSQAGRTAGITGARSGLVDEVFRLVSRRRGPRWLLMENVPFMLQLGRGAA
MRHITDALEDLGYMWAYRVVDARAFGLPQRRQRVVMLASRTDDPREVLFSQDAGPLPDGD
PSTAPCGFYWTEGTRGLGWAVNAVPTLKGGSSLGIASPPAVRLPSGEIVTPGIIGAERLQ
GFDPDWTLPAVERAGVRTGHRWKLVGNAVSVRMASWVAGALDDPKPYDVAGDTALLPGQA
WPMAAWGRDRASFKVTVSTMPVHEPPEDLIDFLDDSTLLSARATAGFLKRARAGNLRFAD
GFLDDLDAHLERMGGYTQRVSV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggttgtttgccggtatcggcgggctcgagctggggttggccgaggcagggtgg
acgacgcagctgttgtgcgagatcgatccgggtgccggcgcggtgctgtcggcgcggatg
ccgaacgttccgctgcacaccgacgtcaccacgctgcgcagcctgcccaccggcaccgag
ctcgttgctgccggcttcccctgccaggatctctcccaggctggacggaccgcaggcatc
accggtgctcgctccgggctggtcgacgaggtgttccggctggtctcacgtcgccgcggc
ccgcggtggctgttgatggagaacgtgccgttcatgctgcaactcggacgtggcgcagcg
atgcgacacatcaccgacgcgctcgaggacctcggctacatgtgggcctatcgcgtcgtc
gacgcccgtgcgttcgggttgccgcagcgtcgacagcgcgtggtgatgctggcctcgcgc
accgatgatccgcgtgaggtgctgttctcgcaggatgccgggccgttgcccgacggcgat
ccgagtactgcgccctgcggcttctactggaccgagggcacccgcggactgggctgggcc
gtcaacgccgtccccaccctcaagggcggctcgtccctcggcatcgccagtccgccggcc
gtgcggttgccgtccggggagatcgtcacgcccggcatcatcggggccgagcgactgcag
gggttcgatccggattggacactgcccgcggtcgagcgcgccggggtgcgcaccgggcat
cgctggaagctcgtcggcaatgccgtcagtgtgcggatggcgtcgtgggtggctggtgca
ctcgacgacccgaagccctacgacgtcgcaggcgatactgcattgctgcccggtcaggct
tggccgatggccgcgtggggccgagaccgcgcgagcttcaaggtgaccgtctcgaccatg
ccggtgcacgaaccgcccgaggacctgatcgacttcctggacgactccaccctgctgtcg
gcgcgagccacggccggtttcctcaagcgcgcgcgagccggcaacctccgcttcgccgac
ggctttctcgacgacctcgacgcccacctcgagcgcatgggtgggtacacgcaacgggtg
tcggtgtga
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