Rhodococcus fascians D188: A3L23_04140
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Entry
A3L23_04140 CDS
T04328
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rfa
Rhodococcus fascians D188
Pathway
rfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3L23_04140 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfa03400
]
A3L23_04140 (mutM)
Enzymes [BR:
rfa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A3L23_04140 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A3L23_04140 (mutM)
DNA repair and recombination proteins [BR:
rfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3L23_04140 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_recom
NFACT_N
DUF6487
Motif
Other DBs
NCBI-ProteinID:
AMY55448
UniProt:
A0A165MSL2
LinkDB
All DBs
Position
complement(4336665..4337483)
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AA seq
272 aa
AA seq
DB search
MPELPEVENARQVVEKALGRVIVDIDDTDSFECRPHMPGDIAHALKGGKLTEACRRGKAM
WCETVTADGSGGPTLGIHLGMGGRVIVTAPDGDRTSQYGGGDPHVGERDTDKPEWTRFAM
TFEDGGQLRLFDKRRLGRVRLEPDIDALGPDAAEITRDDFRHRIGSSGAPLKARLLDQAA
IAGVGNLLADEVLWQSKQSPSRRAKTLTTEELDELRVVLRRAIRSAIKKGGVHTGEIIPF
RKADATCPRCGAPMTRGTVGGRTTWWCSREQS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactacccgaagtcgaaaacgctcgacaggtcgtcgagaaagccctcggacgc
gtcatcgtcgatatcgatgacaccgactcgttcgagtgccgtccacacatgccgggcgat
atcgcccacgccctgaagggcggcaagctcaccgaggcatgtcgacgtggcaaggcgatg
tggtgcgaaaccgtcaccgccgacgggtccggtggtccgacgctgggaatccatctcgga
atgggcggccgcgtcatcgtcaccgctcccgacggcgatcgcacgtcgcagtacggtggc
ggcgatccgcacgtgggcgagcgcgacaccgacaagcccgagtggacgcgctttgccatg
acgttcgaagacgggggtcagctccggctcttcgacaagcgccggctcggccgagtgcgc
ctcgaacccgatatcgatgcgttggggcccgatgctgcggagatcacgcgcgacgacttc
cggcaccgaatcggttccagcggagcacctctgaaagcacgtttgctggaccaagcagca
attgcaggcgtcggcaatctgttggccgacgaggtgctgtggcagagcaagcaatctccg
tccagacgggcaaagactctcaccaccgaggaactcgacgagctccgcgttgttctgcgt
cgcgccatcaggtcggcgatcaagaagggtggcgtgcacacaggtgagatcatcccgttc
cgcaaggcggacgcgacgtgcccacgctgcggtgctccgatgactcgcggaacggtgggc
ggccgcaccacgtggtggtgttcgcgcgagcaatcctga
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