Rickettsia felis: RF_0113
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Entry
RF_0113 CDS
T00252
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rfe
Rickettsia felis
Pathway
rfe00541
Biosynthesis of various nucleotide sugars
rfe01100
Metabolic pathways
rfe01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RF_0113 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rfe01005
]
RF_0113 (kdsA)
Enzymes [BR:
rfe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RF_0113 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rfe01005
]
Lipid A
RF_0113 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
AAY60964
UniProt:
Q4UN94
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All DBs
Position
complement(130596..131420)
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AA seq
274 aa
AA seq
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MQKVVKLNNIKIGNDLPFVLIAGPCQIEGKDHALFMAEKLVKLTSKLEIPFIYKSSFDKA
NRTSVNGIRGLGIEKGLEILSKVKSEFDCPIVTDVHSESQCTETAEIADILQIPAFLCRQ
TDLLQAAAKTGKIVKVKKGQFLAPWDMKNVQTKLEAFGVKDILFTERGACFGYNNLVSDM
RSLAIIAELNVPVVFDATHSVQQPGGLGGSTGGERKYVELLAKAATAVGIAGMYMEVHQD
PDNAPSDGPCMIKLDNLESILIKLKKYDKITKEK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagtagtaaaacttaacaatattaaaataggaaatgatttaccgtttgttcta
attgcaggaccttgtcagattgaaggcaaagatcatgcgttgtttatggcagaaaaactt
gttaaattaactagcaaacttgagattccatttatttataaatcttcttttgataaagct
aatagaacttccgtaaatgggattagaggacttggtattgagaaaggtttagaaatttta
tcaaaagtaaaatctgaattcgattgccctattgttactgatgttcattcagagagtcaa
tgtactgaaacagccgaaatagcagatattttacaaattccggcgtttctatgtagacaa
accgatttactccaagctgcagcaaaaacaggtaaaatagtaaaagtaaaaaaaggacag
tttctagctccgtgggatatgaaaaatgtacaaacaaaactagaagcttttggggtaaaa
gatatattatttacagagcgtggtgcatgttttggttataataatttggtatctgatatg
cgtagtcttgcaataatagcggagttaaatgtacctgtagtttttgatgcgacgcattcc
gttcagcagcctggagggctaggaggtagtactggcggagaaagaaaatatgtagagctg
cttgcaaaggcggcaacagctgtaggtatcgccggtatgtatatggaagtacatcaggat
ccagataacgctccaagtgatggtccatgtatgattaagttggataatctagagtccatt
cttatcaaactaaaaaaatatgataaaattacaaaagaaaaataa
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