Rhynchophorus ferrugineus (red palm weevil): 143190730
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Entry
143190730 CDS
T11283
Symbol
Brr2
Name
(RefSeq) U5 small nuclear ribonucleoprotein l(3)72Ab
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143190730 (Brr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rfg03041
]
143190730 (Brr2)
Enzymes [BR:
rfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
143190730 (Brr2)
Spliceosome [BR:
rfg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
143190730 (Brr2)
Complex C
U5 SnRNP specific factors
143190730 (Brr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
AAA_19
SWI2_SNF2
AAA_25
Peptidase_C39
AAA_23
Motif
Other DBs
NCBI-GeneID:
143190730
NCBI-ProteinID:
XP_076251373
LinkDB
All DBs
Position
Unknown
AA seq
2140 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVMSLVGKLSNTKMGDRAQRTK
PGKAEERKVKRQKRDEAQYDFARMKGATLLSEGVDEMVGIIYKPKTQETRQTYEVLLSFL
QEALGDQPRDIICGAADEVLSVLKNDRLKEREKKKETEQLIGSIAEERFALLVNLGKKIT
DFGSDDQKATAGEENIDETYGINVQFEESEEEDDEDMYGEVREEFDEEEGEEAREDGAIH
AENLGVSAEEMKKEKALHPMDIDAYWLQRKLSKIYDDAMVSQAKAAEVLNVLRDATDDRE
FENQLVLLLGYDCFDFIKQLKKHRKMILYCTLLAKSQSDSERQKIKEKMSEDPSLSRILK
LLETGRGDEENGDDEVTSRSRKRKHSSDDDDIDESDKKQVAGNRKLIDFEDLLFAQGSHF
MANKRCQLPDGSFRKQRKGYEEVHVPALKPKPFGENEKLQPIDQLPKYVQPVFDGFKTLN
RIQSRLCKTALEEDENILLCAPTGAGKTNVALLTMMREIGKHINSDGTINADDFKIIYIA
PMRSLVQEMVGNFGKRLSSYNITVHELTGDHQLTREQIAEAQVIVCTPEKWDIITRKGGE
KTFTSLVRLIIIDEIHLLHDERGPVLEALVARTIRTIESTQEDVRLVGLSATLPNYQDVA
AFLRVKPDSGLFYFDNSFRPVSLEQQYIGVTEKKATKRCQIMNEIVYEKTMEHAGRNQIL
IFVHSRNETGKTARAIRDMCLEKDTLGQFLKEGSASMEVLRSEAEQVKNNELKDLLPYGF
AIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYDPTKGRWV
ELGALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLISKLPDMLN
AEIVLGTVQNVRDAVNWIGYTYLYIRMLRQPSLYGITHEQLKHDSLLEQHRADLVHTASL
LLDRSGLIKYDRKTGQFQGTELGRIASQYYCTHETMSTYNQLLKPYLSDIDLFRVFSLSG
EFKNIAVREGEPGELQKLMERVPIPIKESMEEPSAKVNVLLQAYISQLKLESFALMSDMV
YVTQSASRLIRAIFEIVLHRGWAQLADKVLTLCKMVDKRMWQSMSPLRQFKKMPEEIVKK
IEKKYFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELSTHIQPITRSMLKVEL
TITPDFQWEDKLHGNAEAFWIFVEDVDSEVILHHEYFLLKSKYCEDEHLVKFFVPIFEPL
APHYFLRIVSDRWIGAETQLPVSFKHLLLPEKNFPPTELLDLQPLPITALRNEKYESLYA
DKFPQFNPIQTQVFNSVYNGDDNIYIGAPTGSGKTTIAEFAVLRLFDKNPDGRCVYLVPK
DALAELIFADWHNKFGQSLGKKVVLLTGETGTDLKLLAKGQIVITTAEKWDVLSRRWKQR
KNVQNVNLFIVDELHLLGGEDGPVIEVVCSRMRYISSQIEKPIRIVALSASLTDYKDVAQ
WLGCNTNATFNFHPSVRPVPLELHVQGFNLTHNASRLIAMAKPTYNTIVRHSPHKPVIIF
VPTRKQARLTAIDLLTYAASEGQPNKFFHAEEEDIKPFLDRMTDKTLKETLSQGVAYMHE
GLTAADLRLVEQLFDSGAVQIAVVTRDLCWAVNIFAHLVIIMDTQFFNGKIHAYEDYPIT
DVLQMVGRANRPLEDEDAKCVLMCQSSKKDFFKKFLSDPLPVESHLDHRMHDHFNAEVVT
KTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEQSKCI
SVEEEMDCVPLNLGMIAAYYYINYTTIELFSLSLNNKTKIRGLLEIISSAAEYEDIPVRH
REDNILRQLAQKLPNKLTSSSGGQPKFNDPHVKTNLLLQAHLCRLQLGAELQGDTEIVLA
KAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFTQDIIKRCTDK
GVETVFDIMELEDEDRTKLLGLTDSQMADVARFCNRYPNIELTYDVLDRDNIHSGSSVHV
AVQLEREDEINGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQRARVKLDFVAP
SPGHHSYTLYFMSDAYLGCDQEYKFSIDVGDFQSSASDSE
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctgcagcacgacagcttcaatatgaatataaagcgaattcaaatcttgtc
ttgcaagctgatgttcgtttaattgaacgaagaagtcgcgatgaagctacaggagaagtt
atgtcccttgtgggcaaattgtccaatacaaaaatgggtgatagagctcaaagaactaaa
ccaggaaaagctgaggaacgtaaggttaagagacaaaagagagatgaagcacaatatgat
tttgcacgtatgaaaggtgcaacattgttatcagaaggtgttgatgaaatggttggaatc
atttataaaccaaagacacaggaaacacgtcaaacttatgaggtccttttaagttttcta
caagaagctttaggagatcagccacgtgatatcatttgtggtgcagcagatgaggtactt
tctgttttaaaaaacgacagacttaaagaaagagaaaagaaaaaggaaacagaacaacta
attggatctatagctgaggagagatttgccctacttgtaaatttagggaaaaagattact
gattttggtagtgatgatcaaaaagctacagcaggtgaagaaaatattgatgaaacttat
ggaataaatgtacagtttgaagaatctgaagaagaggatgatgaggatatgtatggtgaa
gttcgagaagaatttgatgaagaggaaggcgaagaggctagagaagatggggctattcat
gcagaaaatctgggtgttagtgcagaagaaatgaagaaagaaaaagcacttcatcccatg
gatattgatgcatattggcttcaaagaaagttatcaaaaatctatgatgatgctatggtg
tcacaagcaaaagcagcagaagttttaaatgtacttcgagacgcaactgacgaccgagag
ttcgaaaatcaattagtcttgttgcttgggtatgattgtttcgatttcatcaaacagtta
aaaaagcacaggaaaatgattttgtattgcacacttttggctaagtcacaaagtgactcg
gaacggcaaaaaattaaagagaaaatgtcagaagatccttcattgagtagaattttaaaa
cttttggaaaccggaagaggtgatgaagaaaatggagatgatgaagtaacatcaagatcc
aggaagagaaaacatagtagtgatgatgatgatatagatgagagtgataagaaacaagtg
gctggaaatagaaaactaattgattttgaagacttactgtttgctcagggttcacatttt
atggcgaataaacgatgtcaattacccgatggttcgtttaggaaacaaagaaaaggttat
gaagaagttcatgttccagccttgaaaccgaagcctttcggtgaaaatgaaaaattacag
cctatcgatcaattaccgaaatacgttcagccagtctttgatggatttaaaacattgaat
cgtattcaaagtaggttatgtaagactgctttggaagaggatgaaaatatcttgttgtgt
gctcctactggagcaggtaaaactaatgtggctctgcttacgatgatgcgagaaattggt
aaacacatcaactcagatggtacaatcaacgctgacgacttcaaaattatttacatcgcg
cctatgagatcgttggtacaggagatggtgggaaattttggaaagaggttgtctagttat
aacatcaccgtccacgaattgactggcgaccatcaactcactagagaacagattgctgaa
gcccaggttattgtttgtactccagagaaatgggatatcattacaagaaaaggaggggag
aagacatttacttcgttggttagactcattattattgacgaaattcatttattacatgat
gaaagaggccctgtcctagaagccttagttgctaggactatcagaactatagaatccacc
caggaagacgttagattggtgggcctttccgctactttacctaattatcaagatgtggcg
gcttttttacgcgtcaaaccggattccggattattttattttgacaatagcttcagacct
gtttctttagaacaacaatatattggtgtcacagaaaagaaagccaccaagagatgtcaa
ataatgaatgagattgtttatgagaaaacaatggaacatgcaggtcgcaatcaaatcctg
atatttgttcattcaagaaacgagacaggaaaaaccgcgagagctataagggatatgtgt
ctggaaaaagataccttaggccaattcttgaaagagggttctgcctcgatggaggtgttg
cgatccgaagcagagcaagtaaagaataatgagctgaaagatttactgccatatggcttt
gccattcatcatgctggaatgactagagtggatagaacactagtggaagatttatttgcc
gatagacatattcaagttttggtatcaactgctacattagcttggggtgttaatttacca
gcacatactgttattattaagggtacacagatatatgatccaactaaaggtagatgggtc
gaattgggcgctttagatgtattgcaaatgttgggtcgtgccggtcgccctcagtatgat
accaaaggagaaggcatcttaattaccaatcatagtgaacttcaatattatctctctttg
ctcaatcagcagcttcccattgaatctcagctaatttctaagcttcctgatatgctcaac
gcagaaattgtgctgggtactgtgcaaaatgttagagatgctgttaattggattggttat
acttacctttatataagaatgctgcgacaaccatctttgtatggtataacacatgaacaa
ctcaaacatgattctcttttggaacaacatcgagctgatttagttcatacagcttctttg
ttactggatcgaagtggtctaataaaatatgatcgaaaaacaggacaatttcaaggaact
gaattaggccgaattgcatcgcaatattactgcacccatgagactatgtcgacctataat
cagcttttgaagccatatttaagtgatatcgacctgttcagggtattttcattatcaggg
gagttcaaaaacattgcggtgcgtgagggagaacctggtgagttgcaaaaattgatggaa
cgggtaccgatacctataaaagagagcatggaagagcctagtgctaaagttaatgtccta
ctgcaagcctatatttcgcaactgaagctagagagtttcgctcttatgtctgacatggtg
tatgttactcaatcagcttccagattgatacgggccatatttgagatcgtattgcatcgc
ggctgggcgcagctggccgacaaagtattgactttatgtaagatggtagacaagaggatg
tggcagtcaatgtcaccgttacgacaatttaagaaaatgcccgaggaaattgtgaaaaaa
atagaaaagaaatacttcccttgggaacgattatatgatcttggtcctaacgaaattggt
gaattaatcagagttcctaaactcggcaagactattcataaatacgttcatcagtttccc
aagttggaactttcgacgcatattcaacccattaccagatcgatgcttaaggttgagtta
accattacgccagattttcagtgggaagataaacttcacggaaacgctgaggcgttctgg
atatttgtggaagatgtagattcggaggttattcttcatcatgagtactttctacttaaa
tcgaagtattgtgaggatgagcatttggttaagttttttgttcccatttttgaacccctg
gcaccacactattttttgagaattgtctcagatcgatggattggagcagaaactcaattg
ccagtttctttcaaacaccttcttttacccgaaaagaatttcccacctaccgagttgttg
gatttgcaacctcttccaatcactgctttacgtaatgaaaaatacgaatctttgtatgcg
gataaattcccgcagtttaatcctattcagactcaagtgtttaactctgtttataacggt
gacgataacatatacattggtgcccccactggctctggtaaaactactattgccgagttt
gctgttttgcgcctgtttgataaaaacccggatggtagatgcgtgtacttagtacccaag
gacgctttagctgaacttatttttgccgattggcataacaaatttggtcagagtctcggc
aagaaggttgtgctattaacaggcgagaccggcacagacttgaaactgttggctaagggc
caaattgtaatcactactgccgagaagtgggatgttctatctagaaggtggaagcaacgg
aagaatgtacaaaacgtcaatctttttatagtggatgaactccatcttttaggcggagag
gacggccctgtcattgaagtggtgtgttccaggatgaggtatatatcgtctcaaatcgag
aaaccgatcagaatcgttgcgttgagcgcttctctaacagattataaggatgtggcacag
tggctgggttgtaatactaacgccacgtttaatttccatccaagtgttcgaccagtgccc
ctcgaacttcacgtgcagggtttcaacttaacacataacgcgtcccgtctaattgctatg
gctaaacccacttataacacaatcgtcagacacagtcctcataaacctgtcattatattc
gttccaactagaaagcaggccagacttaccgctatagacttactaacttacgccgcgtca
gagggacaacctaacaagttcttccacgctgaagaagaggacatcaaaccattcttggac
cgaatgacggacaagaccttgaaggaaacattatcacaaggtgtagcttatatgcatgaa
ggtttgacagctgctgatctacgtttggtcgaacaattatttgattctggagctgtccaa
attgccgttgttaccagggatctttgctgggccgttaatatctttgcccacttggtcatt
ataatggatacacaattctttaatggaaaaatacatgcttatgaagactacccaatcaca
gatgtccttcaaatggtgggcagagccaacagacctctggaggacgaggacgccaaatgt
gttcttatgtgtcagtcctcgaagaaagactttttcaaaaagttcttgagtgatccactg
cctgttgagagtcatctagatcatagaatgcatgatcatttcaatgctgaagttgtaacc
aaaactattgagaacaaacaggatgctgtagattatcttacttggacgttcttgtataga
cgactgacccagaatccaaactattacaacttacagggcgtcagtcatagacatctctcc
gatcacttgtctgaactagtagagaatactttatcagatttagagcagtctaagtgtata
agtgttgaagaggaaatggattgtgtgcctttgaacttgggaatgattgcggcttattat
tacattaattacacgaccatagagttatttagtttgtctctaaataataagaccaaaatc
aggggtctgttagagatcatttcttcggctgcggaatatgaagacattcctgtacggcat
cgagaagataatattctaagacagctggctcagaaattgccgaataagttaacgtcatcc
tccggggggcaaccgaaattcaacgaccctcatgtcaagacgaatttattgttacaagct
catctatgcaggttacaattgggtgctgaattacaaggagatacagaaatagttttagct
aaagccattcgattgatacaagcttgcgtggatgtattgagttccaacggttggctgtca
ccagctgtggccgctatggaattggcccaaatggtcactcaagccatgtggagcaaagat
tcctatttgaaacagttgccgcacttcacgcaggatatcatcaagaggtgtacggataag
ggcgtggaaactgtttttgatatcatggagttagaagatgaagaccgaaccaagttgttg
ggtctcaccgatagtcagatggcggacgttgcccgattttgtaatcggtatcctaacatc
gagttgacgtacgatgttttggatagggacaacatccactccggttcatcggtccatgtt
gccgtgcagttagagcgagaggacgaaattaacgggcctgttatagctccgttcttccca
cagaaacgtgaagaaggttggtgggtggtcattggcgatccgaagacgaattctcttctg
tctatcaagaggttaactttgcaacaaagagccagggttaagctagatttcgtggcgccc
agtcctggtcatcacagttacacgctgtattttatgagcgacgcttatttgggctgtgac
caagagtacaagttttccatcgacgttggcgattttcagtcgagcgctagtgattcagag
tag
DBGET
integrated database retrieval system
