Rhynchophorus ferrugineus (red palm weevil): 143190889
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Entry
143190889 CDS
T11283
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3b subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143190889 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rfg03041
]
143190889 (Sf3b1)
03036 Chromosome and associated proteins [BR:
rfg03036
]
143190889 (Sf3b1)
Spliceosome [BR:
rfg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
143190889 (Sf3b1)
Complex B
143190889 (Sf3b1)
Complex C
U2 SnRNP specific factors
143190889 (Sf3b1)
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
143190889 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_MROH2B_C
HEAT_EF3_N
TPR_DNAAF5
HEAT
HEAT_2
HEAT_ECM29
Htt_N-HEAT_1
XMAP215_CLASP_TOG
TPR_IPO5
UME
VPS15-like_hel
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
143190889
NCBI-ProteinID:
XP_076251577
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MDIPRTHEDIEARIRELQDKRKELPVENSKGVGLGESGYFDSEIYDGKDKKYEGYVTSIA
ANDEVDEDEEDVGFSQKRPGLGGSVALLNNVAQSEKDYDPFADRRRPTIADREDEYRQKR
RRMIISPERVDPFADGGKTPDFNARSYTQIMKETLLKSEENELRKKILEKAKDGSLKVQN
GDSKSSQKKRGRWDQTVEESFVPAKKKTLSVTTSSTAATPIWEGDKTPADIRWDETPGHK
GSETPGATPGQSTRIWDATPGAATPGRETPAHDKVSTRRNRWDETPKTERDTPGHSSGWA
ETPRTDRAGADLIQETPTPGASKRRSRWDETPSAATPSQATMTPGAMTPQTPHGTPGHAT
PMLTPGGSTPVGNKAMAMSTPTPGHLASMTPEQLQAYRWEREIDERNRPYSDEELDAMFP
PGYKVLPPPAGYIPIRTPARKLTATPTPLMGQTPAGFFIQTEDKSAKYLDNQPKGQNLPF
MKPEDAQYFDKLLVDVDEEALSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREF
GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDED
YYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLP
FLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTITA
LGIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYT
REVMLILIREFQSPDEEMKKIVLKVVKQCCSTDGVEAQYIKEEILPQFFKHFWNHRMALD
RHNYRQLVDTTVEIANKVGASEIINRIVDDLKDENEAYRKMVMESIEKIMGNLGAADIDS
RLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAK
VRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM
TKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELL
KAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPF
TVLPALMNEYRVPELNVQNGVLKSMSFLFEYIGEMGKDYIYAVVPLLEDALMDRDLVHRQ
TACAAIKHMALGVYGFGCEDALVHLLNYVWPNIFETSPHLVQAFMDAIEGMRVALGPIKI
LQYTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIANDPKNQYIRYELDYVL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggatataccgcggactcatgaagatatcgaagcccgaattcgggaactacaagacaaa
aggaaagaactccctgtggaaaattcgaagggagtagggttaggtgaaagtggttatttc
gatagtgagatttatgatggtaaagataaaaagtatgaaggatacgtaacatctatagca
gcaaatgacgaagttgatgaggatgaagaagacgttgggttttctcagaaacgtccgggg
cttggaggttcggttgcgttgcttaataatgtggcacaaagtgagaaagattatgatccc
tttgctgatcgaagacgacctactatcgcagacagggaagatgagtataggcaaaaacga
agaaggatgattatatcacctgagcgtgtggatccttttgctgatggcggaaaaacacct
gatttcaatgctcgtagctatacacagattatgaaagagaccctcctgaagagcgaagaa
aatgagctaagaaagaaaattttggaaaaagcaaaagatggaagcttgaaagtgcaaaac
ggtgattctaaaagtagccagaaaaagaggggaaggtgggatcagaccgtcgaggaatcc
tttgtaccggccaaaaaaaagacgctttccgttacgacgagcagtaccgctgcgacgccg
atttgggagggtgataaaacaccagcagatattcgttgggatgaaactccaggtcataaa
ggtagtgaaacacccggggctacgcccggtcaatccacccgaatctgggatgctacgcca
ggagcggctactccaggaagagaaactccagctcacgataaggtttcaacgagaagaaat
cgttgggacgaaacgccgaaaaccgaaagagacactcctggtcactccagtggctgggcg
gaaacgcccagaaccgacagggcgggcgcggatctcatacaagagactcccacaccggga
gcatcgaaacgcagatccagatgggacgagacgccctccgcggcaacgccctcccaagcc
acgatgacaccaggagccatgacgccccaaaccccacacggcacgcccggacacgcaact
cccatgctgacgccggggggatcaactcccgtcggtaacaaggctatggccatgtccact
cccactcccggtcatctggcttcgatgacgccggaacagcttcaagcctacagatgggaa
cgggaaatcgacgagagaaatcggccgtattcggatgaagaactcgacgcgatgttcccg
cccggttacaaagtgctgccgcctcccgctggctatatacctatacgcacaccggctagg
aaactaaccgccactcccactcccctgatgggtcaaactcccgcagggttcttcatccag
accgaggacaaaagcgcgaaatacctcgacaaccaaccgaaaggccagaatctgccgttc
atgaaaccggaagacgcccagtatttcgataagctcctggtggatgtcgacgaggaggct
ttgagcccggaggagcaaaaagagaggaaaataatgaagctgctgttgaagatcaagaac
ggcaccccgccaatgcggaaagcagccctaagacagatcacggataaggcccgagaattc
ggcgctggcccgctattcaaccaaatccttccgctccttatgagtcctacgctggaagac
caagaacgtcatttactggtgaaggtcatcgataggatcttgtacaagttggacgatttg
gtacgaccgtacgtgcataaaatactcgtggtgatcgagcccctcttgatcgatgaagat
tactacgctcgcgtggaaggtcgtgaaattatttccaatctggcgaaagcggcaggcttg
gcgacaatgatttccactatgaggccggatatcgacaacatcgacgaatacgtcaggaac
accaccgccagggcttttgctgtcgtcgcttccgctttaggtatcccctctctgttgcct
tttttgaaagccgtctgccgttctaagaaatcctggcaagctcgtcacaccggtataaaa
attgtacaacagatcgccattttgatgggctgtgccatattgcctcatttaagatctcta
gttgagatcatcgagcacgggcttgttgacgaacaacagaaggtcaggacgataactgct
ctaggtattgccgccttagccgaggccgcaactccatatggtattgagagttttgattca
gtcttgaaacccctctggaaaggtatcagaactcatcgcggtaaaggcttggctgccttc
ttaaaagctattgggtacttaatccctcttatggacgccgaatacgccaactattacacc
agggaagtgatgttgattttgatccgagaattccagtccccagacgaagagatgaaaaag
attgtattgaaagtagttaagcaatgttgctcgaccgacggtgtggaggctcagtacatc
aaagaagaaatattgccgcagttcttcaaacatttctggaatcatcgcatggcattagac
aggcataattatcggcaattggtggataccactgtcgaaatagccaataaagttggtgct
tcggagatcattaaccgaatagtggatgatttaaaagacgagaatgaagcgtacaggaaa
atggtgatggagagtatcgaaaaaatcatgggtaacttaggagcagctgatattgactcc
cgcttggaggaacaacttattgatggtattttgtatgctttccaagaacaaacgaccgag
gatgtggtgatgcttaatggcttcggtactatagttaatcagttgggaaaaagggtgaag
ccgtatctaccccaaatttgcggtactatcctgtggaggttaaataacaaatcggctaaa
gtacgacagcaggctgcagatttgatttcaagaattgcggtagtgatgaagacatgccag
gaggaaaaactgatgggacatttaggcgtggtactatatgaatatttaggagaagaatat
cctgaggttttaggttcaattcttggcgccttaaaagctatagtgaatgttattggcatg
acaaagatgactccgcctattaaagacctgttgccccgtttaacaccgattctgaaaaat
cgacacgaaaaagtacaggagaattgcatagatctggtgggacgtatcgcagacagaggt
ccagaatacgtatcggccagggaatggatgagaatatgcttcgaattgctggaattgttg
aaggcgcacaaaaaagccatccgcagagccacagtaaacaccttcggttatatcgccaaa
gccatcggtccccatgacgtcttggctacattgctgaataacttgaaggttcaggaacgt
cagaacagagtatgcacgaccgtggccatagctatcgttgcggaaacttgttctcctttt
acagtattaccggccttgatgaacgaatacagagttccggagcttaatgtacagaatggt
gttctaaagtcgatgtcgtttttgtttgaatatattggagaaatgggcaaagactatatt
tatgccgtggtacctttattggaagatgctttaatggatcgagatctggttcatagacaa
acagcttgcgcggccattaaacacatggcgttgggagtttacggattcggatgtgaagac
gcgcttgttcatctattgaattatgtgtggcccaacatatttgaaaccagtccacatctt
gtacaggcctttatggacgcgatagaaggaatgagagtcgctcttggaccaattaagatt
ctacaatatactttacagggattatttcatccagctaggaaggttcgtgacgtctattgg
aagatatataactcattgtacatcggcggacaggacgctttagttgccggctatccaaga
attgcaaatgatccgaaaaaccagtacattagatatgaacttgattatgttttatag
DBGET
integrated database retrieval system
