Rhynchophorus ferrugineus (red palm weevil): 143198493
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Entry
143198493 CDS
T11283
Symbol
Xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
143198493 (Xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143198493 (Xpc)
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
143198493 (Xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
143198493
NCBI-ProteinID:
XP_076263858
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MKRNRGSAKKYIESSDSENDRPLKKTPPSSEEKPTRESDSSSESDIENYLSKPEKLDFSS
DFFKTKNGTGFENIEKNIFSGISRLSDSGSEADEENGEKQEVSHNSDNTQTSTVTPMDNL
QTTMTFQQLQDYTKRIEEAKQFVDKYKARKEAEENKNDIQQLLALGEKNNELLYKLNPGD
FHSSDFDSYESDDGGWKEVKSQPVQETEKSLIPQKNIEITVSMPETIKKRKGVDLITAMK
RRLNRIRKENQVLVHKVHLLCWLAHGNYINTILNETEILAVALSLIPSEQCYPSDRPDLS
YLEQITKWYGRTIKLLEKPVPANFTFDTLIRLQIKKKEAYNKKMLACIFITILRALGIQC
RIVLSFLVEPLRPPTSELHSLSQKEQKASDKKRSSVVDKTQNEPVAGTSKSPQVVKQESN
KAIKMTGDQDSDESHNKSKKRPHSTESQTVSRKKNMKSEKDIDKLTIPKPARQSKSPKNA
GGVKTEQKTPVSKKKNNASPQTSRSSSKTEKKEVESKTDPKKSNEKSSSTKRCKSLNPPE
KGQKTNVDTVAKDSASLLTQPKITISKSPKVSPKDSASRLGKTKETTRKDDLSVPKLRRR
PKSAETKDKKQKKSVVARSKSTESSETVNRRGRPRKNIPQVDGVWDSDSDEELIIPQLDG
VNDGKKSSKPNLKVLKSSSKQTNKKKIVQSDSESDFELPRAKSNVKPNLKKLNCNKPKQI
DIRNDIITLVKGRIAEQKHIDRKRLVKKRKPADHLSDSDSDYVPEPIKKKHHDSEDDFVP
KVKVKRRVQIPGKIPEEEKLVKKKMGNDVWVEVFLEAEEKWISVDVVHGQVHCVKEIYQR
ASHPVTYVVAWDNNNNLKDVTQRYCPNFNTITRKERVYQSWWSESLKPFMGLPTARDKEE
DNDFVRQQMDQPLPKSIAEYKNHPLYVLKRHLLKFEGLYPPDTPTLGFVRGEAVYPRTCV
YLLHSRDIWLKQAKVVKLGEQPYKIVKARPKYDKLSNKIITDQLLEIYGPWQVQDYEPPT
AENGIVPRNAFGNVDLFKPCMLPKGTVHLKLPGLNKVARRMNIDCASAIIGFDFHGGWSH
PIYDGFVVCKEYEDQLVLAWEIEQDELDRKEQEKIDKRVYGNWKRLIRGLLIREKLKAKY
DFGDTSAGTSKDKKKKKTPSFCTKTLKPKG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaacagaggtagtgcgaaaaaatacatagaatccagcgatagtgaaaatgat
aggcccctaaaaaagacaccccccagttccgaagaaaaaccaacccgagaaagcgattcc
tccagtgaaagcgacatagagaactacttatcgaagccagaaaagttagatttcagttct
gatttttttaagaccaaaaatggtactgggttcgaaaatatcgaaaagaatatattttcc
ggtatcagcaggcttagtgattcagggtctgaagcagatgaggagaatggtgaaaagcaa
gaagtctctcataacagtgataatacacagacatcaacagttacaccaatggataattta
caaacaacaatgacctttcaacaattacaagattacacaaagagaattgaagaagccaaa
caatttgttgataaatataaagccaggaaagaagcagaggaaaataaaaatgatatacag
caattactggctttaggagaaaagaacaatgaattattgtataagttaaatccaggtgat
ttccattcaagtgattttgattcatatgaatctgatgatgggggttggaaagaagtcaaa
tcccagccagtacaagaaactgaaaaatcactgattcctcagaaaaacattgaaattact
gtgtcaatgcctgagactattaaaaaaagaaaaggtgttgatttaattactgcaatgaaa
aggagactaaacagaattagaaaagaaaatcaagttttggtccacaaagttcatttgtta
tgctggttagcacatggtaattatattaatacaattttaaatgaaactgaaatcttagct
gtggcattatcgcttatcccatctgaacaatgttacccatcagaccgccctgatctttca
tatctggaacaaatcaccaagtggtacggaaggacaataaaactacttgagaaacctgtg
ccagccaattttacctttgatacattaatacggcttcaaatcaagaagaaagaagcatac
aacaaaaaaatgttggcctgcatttttattaccatcctgagagctttaggtattcaatgc
agaatagtcctatcatttctggtggaacctctgcgacctcccaccagcgagcttcattca
ttgagccaaaaagaacagaaggcatctgataaaaagcgttcttcagttgttgataagact
caaaatgaaccagtggctggtacatcaaaatctccacaagtagtgaaacaggaaagtaac
aaggctataaaaatgactggtgatcaagatagtgatgaaagtcacaacaaatcaaagaaa
aggcctcacagtacagaatctcaaacagtaagcagaaagaaaaatatgaagtcggaaaaa
gatatagataaactgaccattcccaaaccagcaaggcagtcaaaaagtcctaaaaatgca
ggtggtgtcaagactgaacagaaaactccagtgtcaaaaaagaaaaataatgctagccct
caaacatcgcgaagttcatctaaaacagagaaaaaagaagttgaaagtaaaactgaccca
aaaaaatcaaacgagaaatcatcatcaactaaacgctgtaaaagcctaaatccccccgaa
aagggtcagaaaacaaacgtcgataccgtggcgaaagactcggcatctctattaacccaa
ccaaaaataacaatctccaagagtccaaaagtatcgcccaaggattccgcgagtcgttta
ggaaaaacaaaagaaaccacaaggaaagatgatctctctgttcccaaattaaggaggcga
ccgaaaagcgccgaaacaaaagataaaaaacaaaagaaaagtgtcgttgcgagatccaaa
agtaccgaaagcagtgaaacggtgaaccgtagaggcagacctagaaaaaacattcctcag
gttgacggtgtgtgggatagcgatagcgacgaagagttgatcattccacagttggatggg
gttaatgatggtaaaaagagctcaaaaccgaatttaaaagtactcaaatcgtcatcgaaa
caaacgaataagaagaaaatcgtccagtcagactcagaaagtgactttgagttgccgaga
gccaaatccaacgtcaaacctaacttgaaaaaactaaactgtaataaaccaaaacaaata
gacattaggaatgatattatcactctcgttaagggtcgcatagctgaacagaaacatatt
gataggaaaaggttggtgaagaagaggaaacctgctgatcatctttctgattcagatagc
gactatgttccagaacctattaagaagaaacatcacgacagcgaggacgatttcgtgccg
aaagtgaaagtgaagaggcgagttcagataccgggaaaaataccggaggaagaaaaactc
gttaaaaagaaaatgggcaacgatgtatgggtggaagttttcctggaagccgaagaaaaa
tggatatccgttgatgttgtccacggccaggttcactgtgtcaaggaaatttatcaaaga
gcaagtcatccagttacatacgtagtggcttgggacaataacaacaatctcaaggatgtt
actcagaggtattgtcccaatttcaacacgatcactagaaaggagcgcgtgtatcagagc
tggtggagtgaaagtttaaaaccattcatgggtttaccgaccgctagagacaaagaggaa
gataatgatttcgtcaggcagcagatggatcagccactgcctaaatcaattgctgagtat
aagaaccaccctctttacgtgctcaagcgccatttgctcaaattcgaaggtctgtatcca
ccagacactcccacgctgggtttcgttcggggtgaggcagtgtatccccgaacctgtgtg
tacctgttgcactctcgagatatttggttgaagcaggctaaagtggtaaaactaggagag
cagccgtacaaaatagtcaaagccagaccaaagtatgataagctgtccaataaaataatt
accgaccaactactggaaatctacggcccgtggcaggtccaagattatgagcccccaacc
gccgaaaacggcatagtacccaggaacgcgtttggcaatgttgacctattcaaaccgtgc
atgttaccgaaaggaaccgttcatttaaaattacctggtctgaataaagtcgcccgtcga
atgaacatcgattgtgcttcagctatcattggcttcgattttcacggtggttggagtcat
ccaatttacgatggattcgtcgtgtgcaaggaatacgaggatcaactggtgttagcctgg
gagatagaacaagacgagctggataggaaagaacaggaaaaaatcgataagagagtgtac
ggtaattggaagaggctgatcaggggcttactgattcgggaaaaactgaaagctaagtac
gatttcggtgatacttccgctggcacttcgaaagacaagaaaaagaaaaaaacaccgagt
ttctgcaccaaaactttgaaaccaaaagggtaa
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