Reinekea forsetii: REIFOR_01091
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Entry
REIFOR_01091 CDS
T05208
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
REIFOR_01091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_01091
Enzymes [BR:
rfo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
REIFOR_01091
DNA repair and recombination proteins [BR:
rfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
REIFOR_01091
Prokaryotic type
REIFOR_01091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATX76241
UniProt:
A0A2K8KQW4
LinkDB
All DBs
Position
1167240..1167944
Genome browser
AA seq
234 aa
AA seq
DB search
MALLDLLQSAAWRQLIEARVDDAQLNDLATFLLEQERAGQILYPAKSNWFRALDSVAPQQ
VRVVILGQDPYHGPNQAQGLSFSVPPGAKLPPSLRNIFKEQQADLGIHNESGDLSRWTGQ
GVLLLNAVLTVSAGQAGSHAKQGWEALTDAVIRALSDGPTPTVFMLWGAYAEKKQQLIDA
SKHLILSAPHPSPLSAYRGWFGCRHFSQANLYLQQQGYAAIDWHTEASPQQSLW
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcactgctcgatctgctccagtccgccgcctggcgacagttgattgaggcgcgtgtc
gacgatgcccaattgaacgatctggccacctttctgcttgagcaggaacgcgccggccag
atcctctatccggccaagtcgaattggtttcgtgcgctcgacagcgttgcaccgcaacag
gtacgggtggtgattctgggccaggatccctaccacggccctaaccaggctcagggctta
agtttttccgtgcccccgggcgcaaaactcccgccgagcttgcgcaatatctttaaggag
cagcaggcggatttgggcatccacaacgagtcgggtgatctatcgaggtggaccgggcag
ggcgtgctgttgctcaatgcggtcttaaccgttagtgcgggccaggccggcagtcacgcc
aagcagggctgggaggcgctaaccgatgcggttatccgggccctaagcgatggccccacg
cccacagtctttatgctctggggcgcctacgcagaaaaaaaacaacagctcatcgatgcc
tcgaaacacctaattctcagtgcgccgcacccctcgcctttgtcggcctatcggggttgg
tttgggtgtcggcatttttcccaagccaacctctatctgcaacaacagggctatgccgcg
atcgattggcataccgaagcctcgccccaacagtctctttggtag
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