Reinekea forsetii: REIFOR_01857
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Entry
REIFOR_01857 CDS
T05208
Symbol
recS
Name
(GenBank) ATP-dependent DNA helicase RecS (RecQ family)
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
REIFOR_01857 (recS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfo03019
]
REIFOR_01857 (recS)
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_01857 (recS)
Enzymes [BR:
rfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
REIFOR_01857 (recS)
Messenger RNA biogenesis [BR:
rfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
REIFOR_01857 (recS)
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
REIFOR_01857 (recS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
TniB
SWI2_SNF2
AAA_22
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ATX76994
UniProt:
A0A2K8KUJ9
LinkDB
All DBs
Position
complement(1987495..1989498)
Genome browser
AA seq
667 aa
AA seq
DB search
MSLSPNLNEKLQASFGFPAFRAGQEQCVQQLLAGHSSLAIFPTGSGKSLCYQFTALQLPA
LTLVVSPLLALIQDQLDFLQAKGVPAASIDSTLSPAQYQQVVADVRSGQTKILMVSVERF
KNERFRQFIEQIPLSMLVIDEAHCISEWGHNFRPDYLKLPQYSQQLNIPLVLLLTATATK
KVKLDMAAKFAIAPEHIVQTGFYRPNLHLDIVPVSNGQRNAELLQQIQAQNGAGSTQAGI
VYVTLQQTAVDVATYLKRQGIDAQAYHAGFPSEERQQIQQRFMQGQLAVVVATIAFGMGV
DKSDIRFVVHYDLPKSIENYSQEIGRAGRDGAPAQCITLANLDGLSTVENFVYGDTPEPS
GIQVVLDAIRQETQAQTDASGQWELQANSLATASNIRLLALKTLLVQLELRQVLVPKYAY
FAEYKFRLMRTQAELLQQFSGERLAFLTALFATADIKKVWGEVRFEALHQQYPSDRQRVI
SALDYLQEQNLIELQTRKMTEVYQVNSAALNQPGLVESLSDYFSTNEQKEIARIGALVRF
FQLDRCLNNNLARYFDDQQVPERCGHCSVCAERVAQLQRYEPEYWPSDDQLSTYLAGFRA
YLQQQAGAAGLNVVISTTLQSRFLTGVSVPLFTRFRVRASVPGFGACQSLRYGEVLAKVE
LLTATLG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagccttagccccaatctgaatgaaaaactgcaagccagctttggctttccggccttt
cgggctggccaagagcagtgtgtgcaacagctgctcgcggggcattcctctttggcgatc
ttcccgaccgggtcgggcaagtcactgtgctaccagtttaccgccttacagctgccggcc
ttgaccctggtggtgtcgcccttgctggccttgattcaggatcaattggactttttacag
gccaagggtgttcccgctgcgagcatcgactccaccctgagcccggcgcaataccaacag
gtagtcgccgatgtacgctcgggccagaccaagatcctgatggtctcggttgaacgcttt
aaaaacgaacgcttccggcagtttattgagcagatcccgctgtcgatgctggtgatcgat
gaggcgcactgtatctccgaatggggccacaacttccggcccgattacctcaagttgccg
caatacagccagcagctgaatatcccgctggtcttgctgctgaccgccacggcgaccaag
aaggtcaagctcgatatggccgccaagttcgccatcgcgcccgagcatatagtgcaaacc
ggcttttatcggcccaatttgcatctggatatagtgccggtgagcaatggacaacgcaac
gccgagctgttgcaacagatccaggcgcagaacggcgctggctctacccaggcaggcatc
gtctacgtcaccctacagcaaaccgccgtcgacgtagccacctacctaaaacgccagggc
atcgatgcccaggcctaccatgccggcttcccgagcgaagaacggcagcagattcaacaa
cgctttatgcaaggtcagttggccgtggtagtggccaccatcgcctttggcatgggcgtc
gacaagtccgatatccgctttgtggtgcattacgacctgcccaaatcgattgagaactac
agccaggaaattggccgggccgggcgcgatggcgcgccggcacagtgcattaccctggcc
aatcttgatggtctgagcacggtcgagaacttcgtctacggcgacaccccggaaccgagc
ggtatccaggtggtgctcgacgccatccgccaggagacccaagcccagaccgacgcaagc
ggtcaatgggagttacaggcgaacagcctggccactgccagcaatattcgcctactggcg
ttaaagaccctgctggtgcagctggaattgcgccaggtgctggtgcccaaatatgcctac
tttgccgaatacaaatttcgcctgatgcgcacccaggccgagttattgcaacagtttagc
ggcgagcgcttggcctttttaacggcgctgttcgccaccgccgacattaaaaaggtttgg
ggtgaggtgcgcttcgaggccttgcaccagcagtatccgagcgatcggcaacgggtgatc
agcgccctagactatttgcaggaacaaaatctgattgaactgcaaacccgcaagatgacc
gaggtttatcaggtcaacagcgcggcgctgaaccagccgggtctggttgagtccttgagc
gactatttcagcaccaatgagcaaaaagagatcgcgcgcatcggcgccctggtgcgattt
tttcaattggatcgttgtttaaacaacaatctggcccgatattttgatgatcagcaggtc
ccagagcgctgcggccattgttcggtctgtgccgagcgggttgcccagttacagcgttat
gagccggagtattggccgagcgatgatcagctgagtacctatctggctggcttccgggcc
tatttacagcaacaggccggtgccgcgggcttaaacgtggtgatcagcaccaccttgcaa
agccgcttcttaaccggcgtgtcggtaccgctctttacccgctttcgcgtgcgcgcctcg
gtgcccggttttggcgcctgccagagcctgcgctatggcgaggtgttggccaaagttgag
ctgctgacggcaactctcgggtag
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