Rhinolophus ferrumequinum (greater horseshoe bat): 117018290
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Entry
117018290 CDS
T07722
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04340
Hedgehog signaling pathway
rfq04360
Axon guidance
rfq05200
Pathways in cancer
rfq05205
Proteoglycans in cancer
rfq05217
Basal cell carcinoma
rfq05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117018290 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
117018290 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117018290 (SHH)
05205 Proteoglycans in cancer
117018290 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
117018290 (SHH)
05217 Basal cell carcinoma
117018290 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rfq01002
]
117018290 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rfq00536
]
117018290 (SHH)
Peptidases and inhibitors [BR:
rfq01002
]
Cysteine peptidases
Family C46: hedgehog family
117018290 (SHH)
Glycosaminoglycan binding proteins [BR:
rfq00536
]
Heparan sulfate / Heparin
Morphogens
117018290 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
117018290
NCBI-ProteinID:
XP_032955113
Ensembl:
ENSRFEG00010016418
LinkDB
All DBs
Position
26:1562876..1576221
Genome browser
AA seq
452 aa
AA seq
DB search
MDEMLLLARCLLVVLVSSLLMCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLSADDQGRLLYSD
FLTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNESGAGRPPGGAPGRRALFA
SRVRPGQRVYVVAERGGDRRLLPAAVHSVTLREEATGAYAPLTAQGTILINRVLASCYAV
IEEHSWAHRAFAPFRLAHALLAALAPLRTDRGGDGGGGGGGRVLPPAPGAPEAADAPGAA
GIHWYSQLLYQIGTWLLDSEALHPLGMAVKSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgctgctgctggcgagatgtctgctggtggtgctcgtgtcctcgctgctg
atgtgctcggggctggcgtgtggacccggcaggggatttgggaagaggaggcaccccaaa
aagctgacccctttagcctacaagcagtttatccccaacgtggctgagaagaccctaggg
gccagtggaagatatgaagggaagatctcgaggaactcggagcgatttaaggaactcacc
cccaattacaacccggacatcatttttaaggatgaggagaacaccggagcggaccggctg
atgactcagaggtgtaaggacaagttaaatgctttggccatctcagtgatgaaccaatgg
ccgggagtgaagcttcgggtgaccgagggctgggacgaggacggccaccactcggaggag
tcactgcactatgaaggccgcgccgtggacatcaccacatccgaccgcgaccgaagcaag
tacggcatgctggcacgcctggcagtagaggccggcttcgactgggtgtactacgagtct
aaagctcacatccactgctccgtgaaagcagagaactcagtggcggccaaatcgggcggc
tgcttcccaggctcggccacggtgcacctggaacagggcggcaccaagctggtgaaggat
cttcgccctggggaccgcgtgctgtcggccgacgaccagggccggctgctctacagcgac
ttcctcaccttcctggaccgcgacgacggggccaagaaggtcttctacgtgatcgagacg
cgggagccccgcgagcgcctgctgctaaccgccgcgcatttgctcttcgtcgcgccgcac
aacgagtcgggcgctgggcggccgccggggggcgcgccggggcgccgggcgctcttcgcc
agccgcgtgcggccgggccagcgcgtgtacgtggtggccgagcgcggcggggaccgccga
ttgctgccggccgcggtgcacagcgtgacgctgcgcgaggaagccacgggcgcgtacgcg
ccgctcacggcgcagggcaccatcctcatcaaccgggtgctggcatcgtgctacgcggtc
atcgaggagcacagctgggcgcaccgagccttcgcgcccttccgcctggcgcacgcgctg
ctggctgcgctggcgccgctgcgcacggaccgcggcggagacggcggcggcggaggcggt
ggccgcgtcctgcctcccgcgccaggtgcgccggaggcggcggatgcgccaggggccgcg
ggcatccactggtactctcagctgctctaccaaataggcacgtggctgctggacagcgag
gccctgcaccctctcggcatggcggtcaagtccagctga
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