Rhinolophus ferrumequinum (greater horseshoe bat): 117021735
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Entry
117021735 CDS
T07722
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03410
Base excision repair
rfq05166
Human T-cell leukemia virus 1 infection
rfq05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117021735 (POLB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117021735 (POLB)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117021735 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117021735 (POLB)
Enzymes [BR:
rfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117021735 (POLB)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
117021735 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
117021735 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
Cdd1
HHH
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
117021735
NCBI-ProteinID:
XP_032960923
Ensembl:
ENSRFEG00010014661
LinkDB
All DBs
Position
4:complement(58214229..58241416)
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccacaggagactctcaacgggggaatcaccgacatgctcaca
gaactcgcaaactttgagaagaacgtgaaccaggcgatccacaagtacaatgcttacaga
aaagcagcatctgtgatagcaaagtacccacataaaataaagagtggagcagaagctaag
aaattgcctggagtaggaacaaaaattgctgaaaagattgatgagtttttagcaactgga
aaattgcgtaaactggaaaagattcggcaggatgatacgagttcgtccatcaatttccta
actcgagttactggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagatctcagaaaaaatgaagataaattgaaccatcatcagcgaattgggctg
aaatattttgaggactttgagaaaagaattcctcgtgaagagatgttacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgagtacattgctacagtctgtggcagt
ttcagacgaggggcagagtccagcggtgacatggacgttctcctgacgcatccaagcttt
acctctgagtcaaccaaacagccaaagctgttacatcgtgttgtggagcagttacaaaag
gtccattttattacagatactctgtcaaaaggtgaaacaaaattcatgggtgtttgccag
cttcccagtaaaaatgatgaaaaggaatatccacacaggagaattgatatcaggttgata
cccaaggatcaatattattgtggtgttctctatttcacggggagtgatattttcaataag
aatatgagagctcatgccctagaaaagggcttcacaatcaatgaatatacaatccgtccc
ctgggagtcactggagttgctggagaacccctgccagtggatagcgagaaagacatcttt
gactacatccagtggaaataccgagaacccaaggatcgaagtgaatga
DBGET
integrated database retrieval system
