Rhinolophus ferrumequinum (greater horseshoe bat): 117026791
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Entry
117026791 CDS
T07722
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03015
mRNA surveillance pathway
rfq05014
Amyotrophic lateral sclerosis
rfq05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117026791 (TARDBP)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117026791 (TARDBP)
05022 Pathways of neurodegeneration - multiple diseases
117026791 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117026791 (TARDBP)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117026791 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
117026791
NCBI-ProteinID:
XP_032969728
Ensembl:
ENSRFEG00010014931
UniProt:
A0A671FEY6
LinkDB
All DBs
Position
9:7400168..7408084
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AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQSQSGPSGNNQSQGSMQ
REPNQAFGSGSNSYSGANSGAAIGWGSASNAGSGSGFNGGFGSSMDSKPSSWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtatattcgggtaaccgaagatgagaatgacgagcccattgaaataccatcg
gaagacgatggcacggtgctgctgtccacagttacagcccagtttcccggggcctgtggg
ctgcgctacagaaacccagtgtcgcagtgtatgagaggtgtccggctggtagaaggaatt
ctgcacgccccagacgctggctggggaaatctagtatatgttgtcaactaccccaaagat
aacaaaagaaaaatggatgagacagatgcttcatcagcagtgaaagtgaaaagagcagtc
cagaaaacatctgatttaatagtgttgggtctcccatggaaaacaactgaacaggatcta
aaagaatattttagtacctttggagaagttcttatggttcaggtcaagaaagacattaaa
actggtcattcaaaaggatttggctttgttcgatttacggaatatgaaacccaggtgaaa
gtaatgtcacagcgacatatgatagatggacggtggtgtgactgtaaacttcctaattct
aagcaaagcccagatgagcctttgagaagcagaaaggtgtttgttgggcgctgcacagag
gacatgacagctgacgagctgcggcagttcttctgccagtacggagaggtggtggacgtc
ttcattcccaaaccgttcagggcttttgcctttgttacctttgccgatgaccaggttgcc
cagtctctttgtggcgaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaaggagtggaagatttggtggtaatccg
ggtggctttgggaaccagggtgggtttggtaacagcagggggggtggagctggcttggga
aacaatcaaggtagtaacatggggggagggatgaacttcggtgctttcagcattaacccg
gcgatgatggctgcagcccaggcagcgctgcagagcagctggggcatgatgggcatgctg
gccagccagcagagccagtcgggcccgtcaggtaacaaccaaagccaaggcagcatgcag
agggagccgaatcaggccttcggttctggaagtaactcgtacagtggtgctaattcaggg
gcagcgattgggtggggctcggcatcaaacgcaggctcaggcagcggttttaatggcggc
tttggctcaagcatggattctaaaccttccagctggggcatgtag
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