Rhinolophus ferrumequinum (greater horseshoe bat): 117028592
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Entry
117028592 CDS
T07722
Symbol
CNTN1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04514
Cell adhesion molecule (CAM) interaction
rfq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117028592 (CNTN1)
04517 IgSF CAM signaling
117028592 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rfq04515
]
117028592 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rfq00537
]
117028592 (CNTN1)
Cell adhesion molecules [BR:
rfq04515
]
Immunoglobulin superfamily
Contactins
117028592 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rfq00537
]
Others
117028592 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Ig_4
Pur_ac_phosph_N
C2-set_2
fn3_SORL1
Interfer-bind
ChitinaseA_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
117028592
NCBI-ProteinID:
XP_032973273
Ensembl:
ENSRFEG00010004639
LinkDB
All DBs
Position
10:44008514..44295993
Genome browser
AA seq
1020 aa
AA seq
DB search
MKMWLLISHLVIISFTTCLSEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESPEGK
VSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGVYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPY
PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGTYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATGKPIP
TIRWLKNGYSKQYHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEMN
PMKKKILAAKGGRVVIECKPKAAPKPKFSWSKGTEWLVNGSRTLIWEDGSLEINNITRND
GGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTF
VWSFNGYVIDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADL
VVRGPPGPPGGLRIEDIRATSVSLTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPI
IEGNMEAAKAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG
SNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDIGRYVHKDESMRPST
AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEVSVHWKHVVEKIVE
SYQIRYWSVHDKEAAAHRVQVNSQEYSAKLENLLPDTQYFVEVRACNSAGCGPPSEMTET
FTRKAPPSQPPRIISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTH
KHSIEVPIPRDGQYVVEVRAHSEGGDGVVSQVKISGTSTLLPSLLGLLLPACGILVYLEF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtggctgctgattagtcaccttgttataatatcttttacaacctgtctgtca
gagtttacatggcacagaaggtatggtcatggagtttctgaggaagataaaggatttgga
ccaatttttgaagagcaaccaatcaataccatttatccagaggaatcaccggaaggaaaa
gtttcattgaactgcagggcacgagccagccctttcccagtttacaaatggagaatgaat
aatggggatattgatctgacaagtgatcggtacagtatggtaggaggaaaccttgttatc
aacaatcctgacaaacagaaagatgctggagtatactactgtttagcatcaaataattat
gggatggtcagaagcactgaagcaaccctcagctttggatatcttgatcctttcccacct
gaggaacgtcctgaggtcagagtgaaagaaggaaagggaatggtacttctctgtgatcct
ccataccattttccagatgatcttagttaccgctggcttttaaatgaatttcctgtattt
atcacaatggataaacgaagatttgtgtctcagacaaacggcaatctctacattgcgaat
gttgagtcatcggacaaaggcaattattcctgctttgtatctagtccttccattacaaag
agtgtgttcagcaaatttatccctctcattccactacctgagcgaacaacaaaaccatat
cctgctgatattgtagttcagttcaaggacatatatgcattgatgggccaaaatgtgact
ttagagtgttttgcacttggcaatcctgttcctgatatccggtggcggaaagtcctggaa
ccaatgccaagcactgctgagatcagcacctctggggctgtcctcaagatcttcaatatt
cagctagaagatgaaggcacatatgaatgtgaggctgagaacattagaggaaaggataaa
caccaggcaagaatttatgttcaagcatttcctgaatgggtagaacatatcaatgacaca
gaggtggatataggtagtgatctctattggccttgtattgccacagggaagcccattcct
actatacggtggctgaaaaatggatattcgaaacagtatcataaaggggaattgagacta
tatgacgtgacttttgaaaatgctggcatgtaccagtgcatagctgaaaacacatatgga
gccatttatgcaaacgcagaattgaagattttggctttggctccaacttttgaaatgaat
cctatgaagaagaagatcctggctgctaaaggaggcagggttgtcattgaatgcaaacct
aaagctgcaccgaaaccaaaattttcatggagtaaagggacggagtggctggtcaatggc
agcagaacactgatttgggaagatggcagcttggaaatcaataacattacaaggaatgat
ggtggtatctatacatgctttgcagaaaataatagagggaaggctaatagcactgggact
cttgttatcacagatcccacgcgaattatattggccccaattaatgctgatattactgtc
ggagaaaatgccaccatgcagtgtgctgcttcctttgatcctgccctggatctcacattt
gtttggtcattcaatggctatgtgatcgattttaacaaagagaacatacattaccagcgg
aattttatgctggacgccaatggggagctgctcatccgaaatgcccagctgaagcacgct
ggcagatacacgtgcactgctcagacaattgtggacaattcctcagcttcggccgacctc
gttgtacgaggtcctccgggccctccaggtggtctgcgaatagaagacatcagagccaca
tctgtgtctcttacgtggagccgtggttcagacaatcatagtcctatatctaaatacact
atccagaccaagactattctttcagatgactggaaagatgcgaagactgatcccccaatt
attgaaggaaacatggaggcagcaaaagcagtggatttaatcccgtggatggagtatgag
tttcgtgtggtagcaaccaatacattgggtataggagagcccagtataccgtcgaacaaa
attaaaacagatggtgccgcacctaatgtggctccttcagatgtgggaggtgggggagga
agcaacagagagctgaccataacatgggcgcctttgtcaagagaatatcactacggcaac
aattttggttacatagtggcatttaagccatttgatggggaagaatggaaaaaagttaca
gttactaatccagatattggtcgatatgtccataaagatgagtccatgcgcccttccact
gcgtttcaagtcaaagttaaggctttcaacaacaaaggagatggcccttacagcctcgta
gcagtcattaattcagcacaagacgctcccagtgaagccccaacagaagtaggtgtaaaa
gtcttatcatcatctgaggtatctgttcattggaagcatgttgtagaaaaaatagtggaa
agctatcagattcgatactggtccgtccatgacaaagaagccgctgcacacagagttcag
gtaaacagccaagagtattcagccaagctcgagaaccttctgcccgacacccagtacttt
gtggaagtcagggcctgcaatagcgcaggctgtggacctcccagtgagatgactgagacc
ttcaccaggaaagcacctccgagccagccaccaaggatcatcagctccataaggtctggt
tcacgttacataattacctgggatcacgtggtcgcactatcaaatgaatctactgtgaca
ggatataaggtactctatagacctgatggccagcatgatggcaaactgtattcaacccat
aagcactccatagaagttccaatccccagggatggacagtatgttgtagaggttcgtgca
cacagtgagggaggagatggagtggtgtctcaagtcaaaatttcaggtacgtctacccta
ttaccaagtcttctcggcttactgctgcctgcctgcggcatccttgtctacttggaattc
tga
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