Rhodoferax ferrireducens: Rfer_3888
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Entry
Rfer_3888 CDS
T00334
Name
(GenBank) beta-lysine 5,6-aminomutase alpha subunit / D-lysine 5,6-aminomutase alpha subunit
KO
K01844
beta-lysine 5,6-aminomutase alpha subunit [EC:
5.4.3.3
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00310
Lysine degradation
rfr00470
D-Amino acid metabolism
rfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
Rfer_3888
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rfer_3888
Enzymes [BR:
rfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.3 Transferring amino groups
5.4.3.3 lysine 5,6-aminomutase
Rfer_3888
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Gene cluster
GFIT
Motif
Pfam:
Lys-AminoMut_A
HTH_15
OAM_alpha
Motif
Other DBs
NCBI-ProteinID:
ABD71587
UniProt:
Q21RL6
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All DBs
Position
complement(4338463..4340019)
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AA seq
518 aa
AA seq
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MTQLHLDQAQIDRARDSARRIARQVFDDMAPFTTTTVERATLRLLGVDGVDENDIPLPNR
VVSHLQAQNLLQHGAAIILAGAMQETGRSAQQVAQAVSSGTLTLSYPKNEAAARHAADAC
AATVCQHIAGQRAHRDDQIKTLGEGKTPWLYLIVATGNIHEDVVQARAAAEQGADIIAVI
RSTGQSLLDYVPFGATTEGFGGTYATQENFRLMRAALDEVGQKVGRYIRLTNYCSGLCMP
EIAAMGALERLDMMLNDSMYGIIFRDINMQRTFIDQFFSRMVNAYAGIIINTGEDNYLTT
ADAFDAAHTVLASQLINEQFATLSGLGPKQMGLGHAFEIHPELENGFLWELAHAQLVRQV
FPDATLKYMPPTKYMTGNIFKGHVQDALFNMVSVLTQQNIHLTGMMTEAIHTPFIQDRFL
AIQNAKYVFGTMKDLHAEIEFKRGGKIEQRAQAVLAEAEAMLAQIEAMGLAGAIGKGMFA
EISRTPTGGKGLDGVIQKAGNYYNPFPHLMLPGENQHA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacccaattgcatttggatcaggcgcagattgaccgcgcgcgtgactcggcgcggcgt
attgcgcgccaggtgtttgacgacatggccccgttcaccacgaccaccgtggagcgcgcc
acgctgcgcctgctcggtgttgatggcgtggacgaaaacgacatccccctgcccaaccgc
gtggtcagccatttgcaggcgcaaaatctgctgcagcacggtgccgccattattctggcg
ggtgccatgcaggaaacgggtcggagtgcccagcaagtggcccaggcggtgtcctcgggc
accctcacactgagctaccccaagaacgaggcagccgcgcgccacgccgctgacgcgtgc
gccgccacggtgtgccaacacattgccgggcaacgcgcgcaccgcgacgatcagatcaaa
accctgggagaaggcaaaaccccctggctgtacctgattgtggccaccggcaatattcat
gaagacgtggtgcaagcccgcgccgcggccgagcagggcgccgacatcattgccgtgatc
cgctccaccggccagagcctgctcgactatgtgccctttggcgccaccaccgaaggtttt
ggcggcacttacgccacgcaggaaaacttccggctgatgcgcgccgcgctggatgaagtg
ggccaaaaggtgggccgctacatccgcctgaccaactactgctcgggcctgtgcatgcca
gagattgccgccatgggcgccttggagcggctcgacatgatgctcaacgactcgatgtac
ggcatcatctttcgcgacatcaacatgcagcgcaccttcattgaccagttcttctcgcgc
atggtcaatgcctacgccggcatcatcatcaataccggtgaagacaactacctcaccacc
gccgacgctttcgatgccgcgcacactgtgctggcctcgcagctgatcaacgaacagttt
gccaccctgtcgggccttggccccaagcaaatgggattgggccatgcgtttgagattcat
cctgagctggaaaacggcttcttgtgggaactggcccacgcgcaactggtgcgccaggtg
tttcccgatgccacgctcaagtacatgccgcccacgaagtacatgacgggcaacattttc
aagggccatgtgcaggacgccttgttcaacatggtgagcgtgttgacacagcaaaacatc
cacttgactggcatgatgaccgaggccatccatacgccgtttatccaggatcgcttcctg
gcgatccagaacgccaagtacgtgtttggcaccatgaaagacctgcacgccgagattgaa
ttcaagcgcggcggcaagattgagcagcgcgcccaggcggtgctggcagaagccgaggcc
atgctggcgcagattgaggccatgggcctggccggagcgatcggcaaaggcatgtttgcc
gagatttcgcgcacgcccacgggcggcaaagggctcgatggcgtgatccagaaggccggc
aactattacaacccgttcccccacctgatgttgcctggagaaaatcaacatgcttga
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