Roseobacter fucihabitans: ROLI_005400
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Entry
ROLI_005400 CDS
T10342
Symbol
ispA
Name
(GenBank) Farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00900
Terpenoid backbone biosynthesis
rfu01100
Metabolic pathways
rfu01110
Biosynthesis of secondary metabolites
Module
rfu_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ROLI_005400 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rfu01006
]
ROLI_005400 (ispA)
Enzymes [BR:
rfu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ROLI_005400 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ROLI_005400 (ispA)
Prenyltransferases [BR:
rfu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ROLI_005400 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WVX47472
UniProt:
A0ABZ2BQG1
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All DBs
Position
complement(542736..543605)
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AA seq
289 aa
AA seq
DB search
MFADRLSASAQAIQQHFDGVLGALDDLPVVRAMAHATHGGKRLRGFLVLESARLHGIDAT
HAIWPATAIEALHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEATAVLAGDALQTLAFEM
VCREEASPDANVRATLALRLARASGAKGMVLGQALDIAAETALTPLTLDQITALQQGKTG
ALIEWAATAGACMARADISALQAYAKALGLAFQIADDVLDVTGDSATLGKAVGKDAEAGK
ATFVSLLGLDTARKRAADLVDQACDSLAGYGTDADTLKEAARFVVTRAH
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgaccgtctgagcgcctccgctcaggccattcaacagcattttgacggggtc
cttggggcgctggatgatctcccggtggtgcgggcgatggcgcatgcgacgcatggcggc
aaacggctgcgcggatttttggtgctcgaaagcgcgcggctacatggcatcgatgcgacc
catgcgatctggcccgccaccgcgatcgaggcgctgcacgcctattcgttggtgcatgat
gatctgccctgcatggatgacgacgatctgcgccggggtcagccgaccgttcaccgcaaa
tgggatgaggctacggcggttctggccggtgacgcgctgcaaacgctggcctttgagatg
gtgtgccgcgaggaggcaagcccggatgcaaacgtgcgcgccacgctggccctgcggctg
gcacgtgccagtggggccaagggcatggtgctgggtcaggcgctggacatcgccgccgaa
accgcgctcacgcccctgacactggatcagattaccgccttacaacaaggcaaaaccggc
gccttgatcgaatgggccgcaaccgccggggcctgcatggcgcgcgccgacatcagcgct
ttgcaagcctatgccaaggccctcgggctcgcctttcagatcgcggatgatgtgctggac
gtcaccggggacagcgcaacccttggcaaagccgtgggcaaagacgcagaggcaggcaag
gccacattcgtgtcgctgctcggactggacaccgcgcgcaaacgcgccgccgatctggtg
gatcaggcctgcgacagcctggcgggttacggaacggacgccgataccctaaaagaagct
gcgcgtttcgtcgtcacgcgcgcgcattga
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