Pseudorhizobium flavum: RFYW14_01488
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Entry
RFYW14_01488 CDS
T07144
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00970
Aminoacyl-tRNA biosynthesis
rfv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RFYW14_01488 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rfv03029
]
RFYW14_01488 (gatB)
Enzymes [BR:
rfv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
RFYW14_01488 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
RFYW14_01488 (gatB)
Mitochondrial biogenesis [BR:
rfv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RFYW14_01488 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
CAD6603866
LinkDB
All DBs
Position
1:1479974..1481476
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AA seq
500 aa
AA seq
DB search
MTIVDVRTPDPKRLIPGATGDWEVIIGMEVHAQVLSKSKLFSGASTEFGKDPNANVSLVD
AAMPGMLPVINEECVRQAVRTGLGLKAKINKRSVFDRKNYFYPDLPQGYQISQFKDPIVG
EGKIVISLGPDRQGNFEDVEIGIERLHLEQDAGKSMHDQHPTMSFVDLNRSGVALMEIVS
KPDMRSSDEAKAYMTKLRSIVRYLGTCDGNMDEGSMRADVNVSVRRPGEPFGTRCEIKNV
NSIRFIGQAIEYEARRQIGILEDGGSIDQETRLFDPNKGETRSMRSKEEAHDYRYFPDPD
LLPLEFDDAFVEELKQHLPELPDDKKERFVRELGLSVYDASVLVSEKAIADYFEAVAAGR
DGKTAANWVINDLLGALNKAGKAIEETPVSPAQLGGIIDLIKAETISGKIAKDLFEIVWN
EGGDPAEIVEARGMKQVTDTGAIEAAVDEIIAANPDQVAKAQAKPALAGWFVGQVMKATG
GKANPQAVQALVKAKLGIEE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgtcgatgtccgcacgcccgatccgaagcgtctcattcccggtgccacgggg
gactgggaagtcatcatcggcatggaggtgcatgctcaggtgctttcgaagtccaaactc
ttctcgggcgcctcgacggagttcggcaaggatccgaatgcgaacgtctcgctcgtcgac
gccgccatgcccggcatgcttcccgtcatcaacgaggaatgcgtgcgccaggccgtccgt
accgggctcggtctgaaggcgaagatcaacaagcgctcggttttcgatcgcaagaactac
ttctatcccgacctgccgcagggataccagatctcgcagttcaaggatccgatcgtcggc
gaaggcaagatcgtgatctctctggggcccgaccggcagggcaacttcgaggatgtggaa
attggcatcgaacgcctgcacctggagcaggatgccggcaagtcgatgcacgaccagcac
cccaccatgtccttcgtcgacctgaaccgatctggcgtggcgctgatggagatcgtctcc
aagcccgacatgcggtcttcggacgaggccaaggcctatatgacgaagctccgctcgatt
gttcgctatctcggcacctgcgacggcaacatggacgagggctccatgcgcgccgacgtc
aatgtctccgttcgtcgcccgggcgagcccttcggcacgcgctgcgagatcaagaacgtc
aactccatccgcttcatcggtcaggccatcgagtatgaggcgcgccgccagattggtatc
ctggaggacggcggcagcatcgatcaggagacccggctctttgaccccaacaagggcgag
acgcgttccatgcggtcgaaggaagaggcgcacgactatcgctatttccccgatccggac
ctcttgccgctcgagttcgacgatgccttcgtcgaagaactgaagcagcacctgcccgaa
ctgcctgacgacaagaaggagcgcttcgtgcgcgagctcggcctctctgtgtatgacgcc
tctgtgctcgtgtcggagaaggcgattgccgactatttcgaggcagttgccgccggccgc
gacggaaagacggctgcgaactgggtcatcaacgacttgctgggtgccttgaacaaagcc
ggcaaagccattgaagagactccggtttcacccgctcagctcggcggcatcatcgacctc
atcaaggccgagaccatctccggcaagatcgcgaaggacctcttcgagatcgtctggaac
gagggcggcgatccggcggaaatcgtcgaggcgcgcggcatgaagcaggtgaccgacacc
ggcgccatcgaggccgccgtcgacgagatcatcgccgccaacccggatcaggtcgccaag
gcacaggcaaagcctgcattggccggctggttcgtcggccaggtgatgaaggcgaccgga
ggcaaggcgaatccacaggcggtccaggcattggtgaaggcgaagctcggcatcgaggaa
tag
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