Pseudorhizobium flavum: RFYW14_01626
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Entry
RFYW14_01626 CDS
T07144
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RFYW14_01626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_01626
Enzymes [BR:
rfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RFYW14_01626
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RFYW14_01626
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CAD6604781
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All DBs
Position
1:complement(1608211..1609005)
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AA seq
264 aa
AA seq
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MKIATWNINGVKARIDNLRQWLSDSAPDIVCLQEIKSVDENFPRFEIEALGYHVETHGQK
GFNGVALLSKIRPDEVIRGLPEGDGDDQSRYIEGVFSVHGGAVRVASIYLPNGNPADDPV
KYPYKLRWLDRLARHTENCLALEEPLILAGDYNVIPEPHDCYDPAAWATDALFLPETRAA
FRRLEALGLTDAVRATSDAPKLYTFWDYQAGAWQKNNGIRIDHLMLSPEAADRLRSTAIE
KHVRAWEKPSDHVPVTAIFDFEPA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagccacctggaacatcaacggagtgaaggcgaggatcgacaacctccgccag
tggctcagcgactccgctcccgacatcgtctgcctgcaggagatcaagtcggtcgacgag
aactttccccgattcgagatcgaggcactcggctatcatgtcgagacccacggccagaaa
ggcttcaacggcgtcgcgctgctctcgaaaatccgcccggacgaagtgatccgcggtctc
cccgagggtgatggcgacgaccagtcccgctacatcgaaggcgtcttctccgtccatggc
ggtgcggtcagggttgcctcgatctacctgccgaacggcaaccccgccgatgatccggtc
aagtatccctacaagctgcgctggctggaccgactggccaggcataccgagaactgcctc
gcgctggaggaaccgctcatcttggctggcgactacaatgtcataccggagccgcatgat
tgttacgatccggccgcctgggcgacggacgcgcttttcctgccggagacccgtgctgca
ttccgacgacttgaggctcttggcctgacggatgccgttcgcgccaccagcgatgcgccg
aaactttacacgttctgggactatcaggcaggcgcgtggcagaagaacaatggcatccgc
atcgaccaccttatgctgtcgccggaggccgctgatcgtttgcgctcgaccgcgatcgag
aagcatgtgcgtgcgtgggagaaaccgtcggaccatgtcccagtgacggcaatcttcgac
ttcgagcccgcctga
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