Rhizobium gallicum bv. gallicum: RGR602_CH01687
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Entry
RGR602_CH01687 CDS
T03539
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGR602_CH01687 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rga03400
]
RGR602_CH01687 (xthA)
Enzymes [BR:
rga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RGR602_CH01687 (xthA)
DNA repair and recombination proteins [BR:
rga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RGR602_CH01687 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Motif
Other DBs
NCBI-ProteinID:
AJD41026
UniProt:
A0A0B4X1G8
LinkDB
All DBs
Position
complement(1669672..1670463)
Genome browser
AA seq
263 aa
AA seq
DB search
MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEAFPRLEIEAMGYHVETHGQK
GFNGVAILSKATPDEVSRGLPGDALDEQARFIETVFSIPGNRALRVCCLYLPNGNPVDTE
KYPYKLAWMERLRQFAVSRLAYEDVFILAGDYNVIPEPHDCFDPKVWESDALFLPQTREA
FRRLENLGLTDAVRTSSDAVQLYSFWDYQAGAWQKNNGIRIDHLMLSPEAADHMTSVAIE
KHVRAWEKPSDHVPVVAYFDFAA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcgacctggaacatcaacggcgtcaaggcgcgcatcgacaacctcacgcaa
tggctcaaggattccgatccggacatcgtctgcctgcaggagatcaagacgatcgacgag
gccttcccgcggctcgagatcgaggcgatgggctatcacgtcgaaacgcatggccagaag
ggtttcaatggcgttgcgatcctttccaaggccacgccggacgaggtgagccgcgggctg
ccgggcgatgctctcgacgagcaggcgcgttttatcgaaaccgtgttctcgatccccggc
aatcgcgcccttcgcgtctgctgcctctatctgccgaacggcaatcccgtcgacaccgaa
aaatatccctacaagctcgcctggatggagcggctgcgccaatttgcggtctcgcgcctc
gcctatgaggacgtcttcatccttgccggcgactacaacgtgatccccgaaccgcacgac
tgcttcgatccgaaggtctgggaaagcgatgcgctcttcctgccgcaaacgcgcgaggcc
ttccgcaggctcgaaaatctcgggcttaccgatgccgtccgcacctcgagcgacgccgtt
cagctctattccttctgggattaccaggccggcgcctggcagaagaacaacggcatccgg
atcgatcacctgatgctttcgccggaggccgccgatcacatgacgtcggtggcgatcgaa
aagcatgtacgggcctgggaaaagccgtccgaccacgttccggtcgtcgcctatttcgac
ttcgcagcttaa
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