Rubrivivax gelatinosus: RGE_35110
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Entry
RGE_35110 CDS
T01803
Symbol
ada_alkA
Name
(GenBank) DNA-O6-methylguanine-protein-cysteine S-methyltransferase/DNA-3-methyladenine glycosylase Ada/AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGE_35110 (ada_alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rge03000
]
RGE_35110 (ada_alkA)
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_35110 (ada_alkA)
Enzymes [BR:
rge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RGE_35110 (ada_alkA)
Transcription factors [BR:
rge03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RGE_35110 (ada_alkA)
DNA repair and recombination proteins [BR:
rge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGE_35110 (ada_alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BAL96850
UniProt:
I0HV13
LinkDB
All DBs
Position
3756181..3757629
Genome browser
AA seq
482 aa
AA seq
DB search
MGRMFPDADAAYLALAARDARFDGRFFVGVTSTGIYCRPVCRVRTPRRENCRFFASPAQA
EAAAFRPCLKCRPEIAPGLSAMDSSDALADCAARAIEAAVQAGEPVALPALAARLGVGER
HLRRIFAAAHGVAPREYLATQRLLLAKQLLTDTTMPVAQVALASGFESLRRFNAAFLERY
RLAPTALRRARGNAPADPVLRLAWRPPYDVQTMLGFAARRALAGVEQVEGLAWRRTLAWP
HRGAVLDGWIEARFVPERHEVHLRSAPSLAPVLGAVLRRVREALDLDADPAPIAAALAAG
GLAAEGQRLPGAFDGFETAVRIVLGQQVTVAAAGTLAARLVRRYGRPVETPFAALTHAFP
DAATLAAADPEELGRLGIVRQRVRALQALAAAVAEGSLKLERGAALAPTLATLAALPGFG
PWTLQLVALRVLGWPDAWPAGDAGLAGALGTRDPREHERAAEAWRPWRAYAAMALWRPGD
TR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcatgttccccgatgccgacgccgcctacctcgcgctcgccgcccgcgacgcg
cgtttcgacggccgcttcttcgtcggcgtcaccagcaccggcatctactgccgcccggtg
tgccgcgtgcgcacgccgcggcgcgagaactgccgcttcttcgccagcccggcgcaggcc
gaggccgccgccttccgcccctgcctgaagtgccgccccgagatcgcgcccgggctgtcg
gcgatggactcgtcggacgcgctggccgactgcgccgcgcgcgcaatcgaagccgcggtg
caggccggcgagccggtggcgctgccggcgctggccgcgcgcctgggcgtgggcgagcgc
catctgcgccgcatcttcgccgccgcgcacggtgtcgcgccgcgtgaatacctcgccacc
cagcgcctgctgctggccaagcagctgctgaccgacacgacgatgccggtggcccaggtc
gcgctggccagcggcttcgagagcctgcgccgtttcaacgccgccttcctggagcgttac
cgcctggcgcccaccgcgctgcggcgcgcgcgcggcaacgccccggccgaccccgtgctg
cgcctggcctggcggccgccctacgacgtccagacgatgctgggctttgctgcgcgccgc
gcgctggccggcgtcgagcaggtcgagggcctggcctggcggcgcacgctggcctggccg
catcgcggcgccgtgctcgacggctggatcgaggcgcgtttcgtgcccgagcgccacgaa
gtgcatctgcgcagcgcgccgtcgctggcgccggtgctgggcgccgtgctgcgccgcgtg
cgcgaggcactggacctggacgccgacccggcgccgatcgccgcggccctggccgccggc
ggcctggcggccgagggtcagcgcctgccgggcgctttcgacggcttcgagaccgcggtg
cgcatcgtgctcggccagcaggtcacggtggccgccgccggcacgctggcggcgcgcctg
gtgcggcgctacggccgcccggtcgagacgccgttcgcggcgctgacgcacgccttcccc
gacgcggcgacgctggccgccgccgaccccgaggaactcggccgcctgggcatcgtgcgc
cagcgcgtgcgcgcgctgcaggcgctggccgcggcggtggccgagggttcgctgaagctc
gaacgcggcgcagcactggcgccgacgctggcgacgctggccgccctgcccggcttcggc
ccctggaccctgcagctcgtcgcgctgcgcgtgctcggctggcccgacgcctggcccgcc
ggcgacgccggcctcgccggcgcgctgggcacgcgcgacccgcgtgaacacgaacgtgcc
gccgaggcctggcggccctggcgcgcctatgccgcgatggcgctctggcgccctggagac
acccgatga
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