Mediterraneibacter gnavus: RGna_10065
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Entry
RGna_10065 CDS
T06719
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00260
Glycine, serine and threonine metabolism
rgn00400
Phenylalanine, tyrosine and tryptophan biosynthesis
rgn01100
Metabolic pathways
rgn01110
Biosynthesis of secondary metabolites
rgn01230
Biosynthesis of amino acids
Module
rgn_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RGna_10065 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
RGna_10065 (trpB)
Enzymes [BR:
rgn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
RGna_10065 (trpB)
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Motif
Pfam:
PALP
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
QHB23807
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All DBs
Position
complement(1999470..2000660)
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AA seq
396 aa
AA seq
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MTNPNGRFGIHGGQYIPETLMNAVIELEEAYNNYKNDPEFNRELTELLNEYAGRPSRLYY
AEKMTKDLGGAKIYLKREDLNHTGAHKINNVLGQALLAKKMGKTRLIAETGAGQHGVATA
TAAALMGMECVVFMGEEDTVRQALNVYRMRLLGADVIPVKTGTATLKDAVSEAMREWTSR
ISDTHYCLGSVMGPHPFPTIVRDFQAVISKEIKDQMLVKEGRLPDAVIACVGGGSNAIGS
FYHFIEDENVRLIGCEAAGRGVDTLETAATIATGRLGIFHGMKSYFCQDQYGQIAPVYSI
SAGLDYPGVGPEHSYLHDIGRAEYVPVTDDEAVNAFEYLAKTEGIIPAIESAHAVAHAMK
IAPAMDPNKIIVITISGRGDKDCAAIARYRGEDIYE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatccaaacggacgcttcgggattcacggtggacagtatattcccgaaacattg
atgaatgcagtgattgaactggaagaagcatataacaactataaaaacgatcccgaattt
aaccgggagcttacagaacttttgaatgaatacgcaggcagaccatccagattgtactat
gcagagaaaatgaccaaagaccttggcggcgccaaaatatatctcaaacgtgaggatctc
aatcataccggtgcgcataaaatcaacaacgtactggggcaggctctgcttgcaaaaaag
atgggaaaaacaaggctgatcgctgaaaccggagcaggtcagcatggtgttgcaactgca
actgctgcagcccttatggggatggagtgcgtggtgtttatgggcgaagaagataccgtt
cgccaggcgctaaatgtatatcgtatgagactgctcggagcagatgtgattccggttaaa
acagggacggcaactctgaaagatgcggtttctgaagcaatgcgtgaatggacgtcccgt
atttcagatacgcattattgtctcggctcagtcatgggaccgcatccgtttccgacgatc
gtgcgtgattttcaggcagtgatctccaaagaaatcaaagatcagatgcttgtcaaagaa
ggaagattgccggatgcggtgatagcctgtgtaggcggtggttccaatgcgattggcagt
ttttatcactttattgaagatgagaatgtcagactgatcggctgtgaagcggcaggaagg
ggcgttgatacattggaaacagcagccacgattgcaaccggcagacttggtatttttcat
ggaatgaagtcttacttttgccaggatcagtacggtcagatcgctcctgtttactccatt
tccgccggcctggattatcccggggtaggtcctgaacactcttatctgcatgacatcgga
agagccgaatatgtgccggtcacggatgatgaggcagtaaatgcatttgaatatcttgca
aagacggaaggcattattccggcaatcgaatcggcgcatgcagttgctcacgcgatgaag
attgcaccggcaatggatccgaataaaatcattgtgattacgatttcaggcagaggtgat
aaggactgcgccgcgattgcccgttacagaggggaggatatttatgagtaa
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