Rhodococcus gordoniae: NMQ04_11075
Help
Entry
NMQ04_11075 CDS
T08682
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rgor
Rhodococcus gordoniae
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rgor03051
]
NMQ04_11075 (pafA)
Enzymes [BR:
rgor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
NMQ04_11075 (pafA)
Proteasome [BR:
rgor03051
]
Prokaryotic proteasome
Bacterial regulatory particles
NMQ04_11075 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UTT46862
LinkDB
All DBs
Position
2370078..2371436
Genome browser
AA seq
452 aa
AA seq
DB search
MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDDLLQLVEHDHAGERVLEELLIDAEQRLAEEGIGGDIFLFKNNTDSAGNSY
GCHENYLVARVGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGSAALVLEMIEAGVPF
RDFALDNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYHARAVEYLHQREPDPHVA
QVVDLWGRVLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRYSMELSDPKIAQLDLAYHDI
KRGRGVFDLLQRKGLAARATDDESVDAAVDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggtatcgagacggagttcggcgtcacgtgtaccttccacggg
catcgccggttgagccccgacgaggtggcccgctatctgttccgccgggtggtgtcctgg
gggcgcagttcgaacgtcttcctgcggaacggggcgcgactgtatctcgatgtcggctcg
caccccgagtacgccaccgccgagtgcgacgacctgctccagctcgtcgaacacgatcat
gccggtgagcgggtcctcgaggaactgctcatcgacgccgagcagcgtctggccgaagag
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaattatctcgtcgcccgcgtcggcgagttctcccgcatctccgatgtg
ctgctgccgttcctggtgacccggcagctgatctgcggcgccgggaaggtgctgcagacc
ccgaaggccgcgaccttctgcctgtcgcagcgcgccgagcacatctgggagggtgtctcg
tcggcgaccacccggtcgcggccgatcatcaacacccgcgacgaaccgcacgccgacgcc
gagaagtaccggcggctgcatgtgatcgtgggggattcgaacatgtccgagaccaccacc
atgctcaaggtggggtcggcggcgctggtgctcgagatgatcgaggccggggtgccgttc
cgggacttcgcgctcgacaacccgatccgcgcgatccgcgaggtctcccacgatctgacc
ggtcggcgcccggtgcgcctggccgggggccggcaggccagcgccctggacatccagcgt
gaatatcatgcgcgggcggtggagtatctgcaccagcgcgaacccgatccgcatgtcgcg
caggtggtggacctgtggggccgtgtcctcgacgccgtcgagtcgcaggacttcgcgaag
gtcgacaccgagatcgactgggtgatcaagcgcaagctgttccagcgctatcaggaccgt
tacagcatggaactgtcggatccgaagatcgcccagctcgacctggcgtatcacgacatc
aaacgcggccgcggcgtgttcgacctgctgcaacgcaaggggttggcggcgcgggcgacc
gacgacgagtccgtcgatgcggcggtggacaccccgccgcagaccacccgggcgaagctg
cgcggtgatttcatcgccgccgcgcaggccgccggccgcgatttcaccgtcgactgggtg
catctgaagctcaacgatcaggcgcagcgcaccgtgttgtgcaaggaccccttccggtcg
gtggacgaacgcgtcgaacggctcatcgcctccatgtga
DBGET
integrated database retrieval system
