KEGG   Rhodanobacter denitrificans: R2APBS1_0415
Entry
R2APBS1_0415      CDS       T02495                                 
Name
(GenBank) ribonucleotide reductase, alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rhd  Rhodanobacter denitrificans
Pathway
rhd00230  Purine metabolism
rhd00240  Pyrimidine metabolism
rhd01100  Metabolic pathways
rhd01232  Nucleotide metabolism
Module
rhd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rhd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rhd00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    R2APBS1_0415
   00240 Pyrimidine metabolism
    R2APBS1_0415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhd03400]
    R2APBS1_0415
Enzymes [BR:rhd01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     R2APBS1_0415
DNA repair and recombination proteins [BR:rhd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    R2APBS1_0415
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Ribonuc_red_lgN Intein_splicing Hint
Other DBs
NCBI-ProteinID: AGG87586
UniProt: I4WQI8
LinkDB
Position
470404..473664
AA seq 1086 aa
MNPVTNRDAAVEIPLQPASYDIWDKKYRLKAKSGEPVDATIDETYQRVARALSEVEASDE
LRGHWYERFLWALRRGAIPAGRITSNAGALAHKPATSTINCTVSGTIRDSMDDILEKVHE
AGLTLKAGCGIGYEFSTLRPRGAYVSGAGAYTSGPLSFMDIYDKMCFTVSSAGGRRGAQM
GTFDISHPDAKEFIRAKREDGRLRQFNLSLLITDGFMQAVEHDQDWPLVFPVHVKEQDEL
DLTDPTQVVWREWPTHENYVDREDGLVACKIYGHIRARHLWDMIMVSTYDYAEPGFILID
KVNEMNNNWWCEHIRATNPCVTADTWVQTAEGPRQVGDLLGHGFMARVDGQDHATGAEGF
FRTATKPVLALQTEEGHRLRLTEDHRVRRVSRLTRWSVDTEWCAAGALQPGDRVLLNDHR
ANAQWPGALSAEQGYLLGLLVGDGTLKHEAAVLSVWPQAAVVNGSVNGGARALMAEALRC
AQTLPHRTDFAGWSEVAGRGEFRMKSAALRDLAFEFGMGVGDKAITPALEQASSEAYRGF
LRGFFDADGSVQGSQAKGVSVRLAQSDLPRLEAVQRMLLRLGMPSRIYRDRRAAGASRLP
DGHGGTRAYATQAQHELVIAGESLQRFAELIGFADSDKAMRLKAALSGYKRTLNRARFVA
TVESLQADGVEDVYDVQVPGINTFDGNGLHAHNCGEQPLPPYGSCLLGSVNLTTFVRDPF
GPKARFDWDEYREVVKVFTRMLDNVVEINGLPLEQQRNEIMGKRRHGMGFLGLGSTVTML
KMRYGSADAVAFTEDVSREMAVAGWEVALELAKEKGAAPILLRDYTVTGDMLRKRPEMAA
DGYKVGDSIPGRVLHAKYSRYMQRIATVAPNLVEQLAETGARFTHHSSIAPTGTISLSLA
NNASNGIEPSFAHSYSRNVIREGKKSKEKIEVLSYELLAYRALINADAKVSTDEAANKLP
DYFVSADDISPKQHVDIQAASQKWIDSSISKTANVPTDYPYEDFKDIYFYAYKQGLKGCT
TFRFNPAAFQGVLVKEADLESTLYRFELEDGSVVELKGNEQVEYDGEMHSAANLFDALKE
GYYGKF
NT seq 3261 nt   +upstreamnt  +downstreamnt
atgaacccagttaccaaccgtgatgccgccgtggaaatcccgctgcagccggcgtcgtac
gacatctgggacaagaagtatcgtctgaaggcgaagtccggcgagccggtcgacgccacc
atcgacgagacctaccagcgcgtggcgcgcgcgttgtccgaggtggaagccagcgacgag
ctgcgcggccactggtacgagcgtttcctgtgggcgctgcgccgcggtgcgatcccggcc
ggccggatcacctccaacgccggcgcgctggcgcacaagccggccacctccaccatcaac
tgcaccgtctccggcaccatccgcgactcgatggacgacatcctggagaaggtgcacgag
gcgggtctcacgctgaaggccggctgcggcatcggctacgagttctccacgctgcgcccg
cgcggcgcgtacgtgtccggcgccggcgcgtacacctcgggcccgttgtcgttcatggac
atctacgacaagatgtgtttcaccgtctccagcgccggcggtcgccgcggcgcgcagatg
ggcaccttcgacatcagccatccggacgccaaggaattcatccgcgccaagcgcgaggac
ggtcggctgcgccagttcaacttgagcctgctgatcaccgacggcttcatgcaggcggtc
gagcacgaccaggactggccgctggtgttcccggtgcacgtgaaggaacaggacgagctc
gacctcaccgacccgacccaggtggtctggcgcgaatggcccacccacgagaactacgtc
gaccgcgaggacggcctggtcgcctgcaagatctacggccacatccgcgcgcggcacctg
tgggacatgatcatggtctcgacgtacgactacgccgagcccggtttcatcctgatcgac
aaggtcaacgagatgaacaacaactggtggtgcgagcatatccgcgccaccaacccgtgc
gtcaccgccgacacctgggtgcagaccgccgaaggcccgcgccaggtcggcgacctgctc
ggccacggtttcatggcgcgggtggacggccaggatcacgccaccggtgccgaaggtttc
ttccgtaccgcgaccaagccggtgctggccttgcagaccgaagagggccaccgcctgcgc
ctgaccgaagaccatcgcgtgcgccgcgtctcgcgcctgacccgctggagcgtggacacc
gagtggtgcgccgccggcgcgttgcagccgggcgaccgcgtgctgctcaacgaccaccgc
gccaacgcgcagtggcccggcgcgctgagcgcggagcagggctacctgctcggtctgctg
gtcggtgatggcacgctcaagcacgaggccgcggtgttgtcggtgtggccgcaggccgcc
gtcgtgaacggctcggtgaatggcggcgcccgtgcgctgatggccgaagccctgcgctgc
gcgcagacgctgccgcaccgtaccgatttcgccggctggtcggaagtggccggtcgcggc
gaattccgcatgaagtcagccgcgttgcgcgacctcgccttcgagttcggcatgggcgtc
ggcgacaaggcgatcaccccggcgctggaacaggcatcgagcgaggcctaccgcggtttc
ctgcgcggcttcttcgacgccgacggttcggtgcagggcagccaggccaagggcgtgtcc
gtgcgcctggcgcagtcggacctgccgcggctggaagcggtgcagcgcatgctgctgcgc
ctgggcatgccgtcgcgcatctaccgcgatcgccgcgccgccggcgcaagccggctgccg
gacggccacggcggcacgcgggcctacgccacccaggcccagcacgagctggtcatcgcc
ggcgagtcgctgcagcgtttcgccgagctgatcggctttgccgacagcgacaaggccatg
cgtctcaaggcggccctgtccggttacaagcgcaccctcaaccgcgcacgattcgtcgcc
accgtcgagtcgctgcaggccgatggcgtcgaggacgtctacgacgtgcaggtgccgggc
atcaacaccttcgacggcaacggcctgcacgcgcacaactgcggcgaacagcccctgccg
ccgtacggctcgtgcctgctcggctcggtcaacctgaccaccttcgtgcgcgacccgttc
ggcccgaaggcgcgcttcgactgggacgaataccgcgaagtggtcaaggtgttcacccgc
atgctcgacaacgtggtcgagatcaacggcctgccgctggagcagcagcgcaacgagatc
atgggcaagcgccgccacggcatgggcttcctcggcctgggttccaccgtgaccatgctg
aagatgcgctacggctcggccgacgcagtcgccttcaccgaggacgtctcgcgcgagatg
gcggtggccggctgggaagtggcgctggagctggcgaaggaaaagggcgccgcgccgatc
ctgctgcgcgactacaccgtcaccggcgacatgctgcgcaagcgcccggaaatggcggcc
gacggctacaaggtcggcgacagcatccccggccgcgtgctgcacgccaagtacagccgc
tacatgcagcgcatcgccacggtggcgccgaacctggtcgagcagctggccgagaccggc
gcgcgcttcacccaccacagctcgatcgcgcccaccggcaccatctcgctgtcgctggcc
aacaacgccagcaacggcatcgagcccagcttcgcccacagctattcgcgcaacgtgatc
cgcgagggcaagaagtccaaggaaaagatcgaggtgctcagctacgagctgctggcttac
cgcgccctgatcaacgccgacgccaaagtgtccaccgacgaggcggccaacaagctgccg
gactacttcgtctccgccgacgacatcagcccgaaacagcacgtggacatccaggccgcc
tcgcagaagtggatcgactcgtcgatctccaagaccgccaacgtgcccaccgactacccc
tacgaggacttcaaggacatctacttctacgcctacaagcagggcctgaagggatgcacc
acgttccgcttcaaccccgccgcgttccagggcgtgctggtcaaggaagcggaccttgaa
agcaccctctaccgcttcgagctggaggacggtagtgttgtcgaactgaaaggcaatgag
caggtggaatacgatggcgaaatgcactccgccgcgaacctcttcgatgccttgaaggaa
ggctactacggcaagttctga

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