Ruminiclostridium herbifermentans: EHE19_009885
Help
Entry
EHE19_009885 CDS
T07161
Name
(GenBank) GntR family transcriptional regulator
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rher03000
]
EHE19_009885
Transcription factors [BR:
rher03000
]
Prokaryotic type
Helix-turn-helix
GntR family
EHE19_009885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
Rrf2
HTH_41
dCache_2
HTH_36
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
QNU68674
UniProt:
A0A4U7JIQ4
LinkDB
All DBs
Position
complement(2408400..2409494)
Genome browser
AA seq
364 aa
AA seq
DB search
MQSRNNQPKYYMLMEHLKEEILMGRIMPGEQIPSENTLTETHKLSRHTVRKAISMLVNEG
YLYTEHGRGTFCLSRSSKRNDSKNIGVIMTYISEYIFPRVIEGIERVLSNNKYSIILKNT
SNILNNEALYFEDLLSKDIEGLIIEPTKSALFSNNLKFYEAFDKHNIPYVFLHGDYRELE
GKSKVVLDDVAGMYSVVEYLAKLGHKNIVGIFKADDTQGIDRHRGYAKALTDTGLPYDPD
SVIWYHTEEQEIKPFAIIKQMLEEKRNIDAIACYNDEIAFKMFPLLNKLGLKVPDDISIT
GFDDSFLSENCPVKLTTVSHPKEVLGEEAAKILLQLINDKNYKNNPIQKIIIPKLIIKDS
CRKR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaagtagaaataatcaacctaagtattatatgcttatggaacatttaaaagaagag
atattaatgggaaggataatgcccggagagcaaataccatcagaaaatacacttactgaa
acacataaattaagtcgacatactgtaagaaaagctatatcaatgctagtaaatgaaggc
tatctttataccgaacatggtcgaggaactttttgcctaagcagaagcagtaagagaaat
gattccaaaaatattggtgttataatgacatatatttcagaatatatttttccaagagtt
atagaaggtatagagagagtactatcaaacaataagtatagcattattttgaaaaataca
agtaatattttaaataatgaagctctttattttgaagacctcttaagtaaggatattgaa
ggattgattattgagcctacaaagagcgcacttttttctaataatcttaaattttatgaa
gcttttgataagcataatattccttatgtgtttttacatggtgactacagagagttagaa
ggtaaatctaaagtagtattagatgatgttgcaggtatgtattctgtagtggagtacctt
gctaagctaggacataagaatattgttggaatttttaaagcagatgatactcagggcata
gacagacatagaggctatgcaaaagcattaaccgatactgggctgccatatgacccagat
tcagttatatggtatcatactgaagagcaagaaataaaaccatttgccataattaagcaa
atgcttgaagaaaaaagaaatatagatgcaattgcttgttataatgatgaaattgctttt
aaaatgtttccattacttaataaattaggactaaaagtacccgatgatatttcaattact
gggtttgatgattctttcttatctgagaattgtcctgtgaagcttactaccgttagtcat
ccaaaagaagtattaggggaagaggcagcaaagatacttttacagttaattaatgataaa
aactacaagaataatcctatacaaaagataattatacctaaacttattataaaagactca
tgcagaaaaagatag
DBGET
integrated database retrieval system