KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_06905
Entry
EUB48_06905       CDS       T06165                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Pathway
rhf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EUB48_06905 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhf03400]
    EUB48_06905 (xth)
Enzymes [BR:rhf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     EUB48_06905 (xth)
DNA repair and recombination proteins [BR:rhf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     EUB48_06905 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: QDL37042
UniProt: A0A515D9F2
LinkDB
Position
complement(1437876..1438646)
AA seq 256 aa
MKLATWNINSLTVRLPQVLDWLTANPVDVLALQELKITDDKFPAAAFLEAGYQAQWFGQK
TYNGVALLSRTPAADVIKNIPGFSDEQSRVLCGTVDGVRVIGAYFPNGQAPGTEKFEYKM
HWLRALRDWVREELATHPKLVLMGDYNITFDDADVWDPVGLKDQIHCTEEERYHLRALVA
LGLMDAHRLFAQPEKSYSWWDYRDFAFRRNHGLRIDHILVSAALKPAVQSCVIDKAPRKN
ERPSDHAPVVIDLQLL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaaactcgcgacctggaacatcaactcgctcaccgtgcgactgccgcaggtgctggac
tggctgaccgcgaatccggtggatgtgctggcgctgcaggaactgaagataacggacgac
aaattccccgccgcggcattcctggaggcgggctaccaggcccaatggttcggccagaaa
acctacaacggtgtggcgctgctgtcgcgcacccccgctgcggacgtgatcaagaacatc
cccggcttcagcgacgagcaatcgcgcgtgctgtgcggcacggtggacggcgtgcgcgtg
atcggggcctatttcccgaacgggcaggcgcctggcaccgagaagttcgagtacaagatg
cactggctgcgcgcgctacgcgactgggtgcgcgaggagctggcgacgcatccgaagctg
gtgctgatgggcgactacaacatcaccttcgacgacgccgatgtgtgggacccagtgggc
ctgaaggaccagattcactgcacggaagaagagcgctaccacctgcgcgcgctggttgcg
ctgggcctgatggatgcccaccggctgtttgcgcagcccgaaaaaagctacagctggtgg
gactatcgcgatttcgcgttccggcgcaaccacggcctgcgcatcgaccacatcctggtc
agcgccgcgctcaagcccgcggtgcagagctgcgtgatcgacaaggcgccgcgcaaaaac
gagcgccccagcgaccatgcaccagtcgtcatcgatctacagttactataa

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