Rhodoferax sediminis CHu59-6-5: EUB48_06905
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Entry
EUB48_06905 CDS
T06165
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EUB48_06905 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhf03400
]
EUB48_06905 (xth)
Enzymes [BR:
rhf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EUB48_06905 (xth)
DNA repair and recombination proteins [BR:
rhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EUB48_06905 (xth)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QDL37042
UniProt:
A0A515D9F2
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All DBs
Position
complement(1437876..1438646)
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AA seq
256 aa
AA seq
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MKLATWNINSLTVRLPQVLDWLTANPVDVLALQELKITDDKFPAAAFLEAGYQAQWFGQK
TYNGVALLSRTPAADVIKNIPGFSDEQSRVLCGTVDGVRVIGAYFPNGQAPGTEKFEYKM
HWLRALRDWVREELATHPKLVLMGDYNITFDDADVWDPVGLKDQIHCTEEERYHLRALVA
LGLMDAHRLFAQPEKSYSWWDYRDFAFRRNHGLRIDHILVSAALKPAVQSCVIDKAPRKN
ERPSDHAPVVIDLQLL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcgacctggaacatcaactcgctcaccgtgcgactgccgcaggtgctggac
tggctgaccgcgaatccggtggatgtgctggcgctgcaggaactgaagataacggacgac
aaattccccgccgcggcattcctggaggcgggctaccaggcccaatggttcggccagaaa
acctacaacggtgtggcgctgctgtcgcgcacccccgctgcggacgtgatcaagaacatc
cccggcttcagcgacgagcaatcgcgcgtgctgtgcggcacggtggacggcgtgcgcgtg
atcggggcctatttcccgaacgggcaggcgcctggcaccgagaagttcgagtacaagatg
cactggctgcgcgcgctacgcgactgggtgcgcgaggagctggcgacgcatccgaagctg
gtgctgatgggcgactacaacatcaccttcgacgacgccgatgtgtgggacccagtgggc
ctgaaggaccagattcactgcacggaagaagagcgctaccacctgcgcgcgctggttgcg
ctgggcctgatggatgcccaccggctgtttgcgcagcccgaaaaaagctacagctggtgg
gactatcgcgatttcgcgttccggcgcaaccacggcctgcgcatcgaccacatcctggtc
agcgccgcgctcaagcccgcggtgcagagctgcgtgatcgacaaggcgccgcgcaaaaac
gagcgccccagcgaccatgcaccagtcgtcatcgatctacagttactataa
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