Rhodoferax sediminis CHu59-6-5: EUB48_18370
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Entry
EUB48_18370 CDS
T06165
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00470
D-Amino acid metabolism
rhf00550
Peptidoglycan biosynthesis
rhf01100
Metabolic pathways
rhf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EUB48_18370
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EUB48_18370
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EUB48_18370
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhf01011
]
EUB48_18370
Enzymes [BR:
rhf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
EUB48_18370
Peptidoglycan biosynthesis and degradation proteins [BR:
rhf01011
]
Precursor biosynthesis
Amino acid ligase
EUB48_18370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
CPSase_L_D2
TTL
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QDL39041
UniProt:
A0A515DF55
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All DBs
Position
complement(3815981..3816976)
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AA seq
331 aa
AA seq
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MSQILSNFGKIEASSLGRVAVLLGGQSAEREVSLMSGHGVLLALRTRGVDAHAFDPAERD
LGDLKREGFARCFIALHGRYGEDGTVQGALELLGIPYTGAGVMASSIAMDKVMTKRVWSA
EGLPTPRYVCLAPDQQTHQQVLAVPDELGLPLIVKPPREGSSIGVTKVKGYSQMQDAVRL
SASYDPDVLCEEFIEGEEVTCPVLGRGAGARALPVIRINAPDGAYDYQNKYFTDTVQYQC
PSGLPAAEEREIQRLVLASYRTLDCRGWGRADLMIRASDRKPFLLEMNTSPGMTGHSLVP
MSARAAGISYEDLCVGVLALATLDYKPKAST
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagccagattctttcaaacttcgggaagatcgaggcgagcagcctgggccgggtcgcg
gtcctgctgggcggccagtcggccgagcgcgaggtttcgctgatgtcgggccacggcgtg
ctgctggcgctgcgcacgcgcggtgtcgacgctcacgccttcgatccggccgaacgcgac
ctgggtgatctgaagcgcgaaggttttgcgcgctgcttcatcgcgctgcatggtcgctac
ggcgaagacggtacggtgcagggcgcgctggagctgctcggcattccctacaccggagcg
ggcgtgatggcatcgagcatcgcgatggacaaggtcatgaccaagcgggtctggagtgcc
gagggcctgcccacgcccaggtatgtgtgcctggcaccggatcaacagacgcaccagcag
gtgctcgccgtgccggacgagctgggcctgccgctgatcgtcaagccgccgcgcgagggc
tcctcgatcggggtcaccaaggtcaaggggtattcgcagatgcaggacgcggtgcgcctg
tcggccagttacgacccggacgtgctgtgcgaagaattcatcgagggcgaagaggtcacc
tgcccggtgctgggccgcggcgccggcgcgcgcgcgctgccggtgatccgcatcaatgcg
cccgacggcgcctacgactaccagaacaagtacttcaccgacacggtccagtaccagtgc
ccgagtggcctgcccgcggccgaggagcgcgagatccagcgcctcgtgctggcgtcgtac
cgcaccctcgattgccgcggctggggccgtgccgacctgatgatccgcgccagcgaccgc
aagcccttcctgctggagatgaacacctcgcccggcatgacgggccactcgctggtgccg
atgtcggcccgggccgcgggcatcagctacgaggacctgtgcgtcggggtgctcgcgctg
gcgacgctggactacaagccaaaggccagcacatga
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