Rhodoferax sediminis Gr-4: EXZ61_14090
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Entry
EXZ61_14090 CDS
T06176
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhg
Rhodoferax sediminis Gr-4
Pathway
rhg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXZ61_14090 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhg03400
]
EXZ61_14090 (xth)
Enzymes [BR:
rhg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EXZ61_14090 (xth)
DNA repair and recombination proteins [BR:
rhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EXZ61_14090 (xth)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QDL55206
UniProt:
A0A515ERB0
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Position
3062715..3063482
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AA seq
255 aa
AA seq
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MKLATWNVNSLGVRLPQVLDWLTANPVDVLALQELKLTDEKFPADAFTAAGYHAHWFGQK
TYNGVALLSRTPATDVIKNIPGFDDDMSRVITGTVDGVRVIGAYFPNGQEPGSDKFEYKM
EWLTALRRWVKEELAAHPKLVLMGDYNITFDEDDVWDPANLEGTIHCTEEERYHLRALIA
LGLTDSHRLFEQPAKSFSWWDYRDAGFRRNRGMRIDHILVSHALRPSVTACTIDKTPRKN
ERPSDHAPVVVDLVP
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgccacctggaacgtcaactccctgggcgtgcgcctgccccaagtgctggac
tggctgaccgccaatcccgtggacgtgctcgcactgcaagaactcaaactcaccgacgag
aagtttccggctgacgccttcaccgctgcgggttaccacgcgcactggtttggccaaaag
acctacaacggcgtagccttgctctcacgcaccccagccaccgatgtcatcaaaaacatc
cccggctttgacgacgacatgtcgcgcgtgatcacaggcacggtcgacggggtgcgcgtc
attggcgcgtattttcccaacgggcaagagccaggtagtgacaaatttgaatacaagatg
gaatggctgactgccctgcgccgctgggtgaaagaagagcttgccgctcatcccaagctg
gtgctgatgggcgactacaacatcacctttgacgaagacgatgtctgggacccggcaaac
ctagaaggcaccatacactgcactgaggaagagcgctaccacctgcgcgcactaattgcc
ttggggctcactgatagccaccgcctgtttgagcagcccgccaagtccttcagctggtgg
gactaccgcgacgcaggcttcaggcgcaaccgcggcatgcgcatcgaccacattttggtg
agccacgccctgcgcccttcggtcacggcctgcaccatcgacaaaacgccgcgcaagaac
gaacgccctagcgaccacgcaccggtggtggtggatcttgtgccgtag
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