Sinorhizobium fredii NGR234: NGR_b12120
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Entry
NGR_b12120 CDS
T00888
Name
(GenBank) pectate lysase-like hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00040
Pentose and glucuronate interconversions
rhi01100
Metabolic pathways
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NGR_b12120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_b12120
Enzymes [BR:
rhi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NGR_b12120
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Other DBs
NCBI-ProteinID:
ACP22665
UniProt:
C3KRF7
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Position
pNGR234b:1180052..1181533
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AA seq
493 aa
AA seq
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MLVARSTASRGSRTWHGPDLVAAPLMLAGLILGSWTGPLRQAEAATAVQEPLSPKLPDGR
QRAFPTAEGFGAGSVGGRGGKVIYVVNTNEKGPGSLRDCVEASGPRVCIFRTGGTITLRE
KSLVVRSPFLTIAGETAPGGGVAIRNGERQLRPSIEIWTNDVIIRHVRLRPGPHARKACC
SGGLGMYSEAARDIILDHISASWGSDETVDSEDASNFTWQWGIASEPLLKGGPGKDDRAR
NMLFTKGGNVSVHHSLFAFGRFRNPQIKMKIPGAVADVVNNVFFSPAWQYVVSFGDEWTH
IQANVVGNYKIAGKKLRNDHMVHLFTESGEGHSIYVKDNYDEPYRTQADQDDSLVLAEDQ
RRFVVKTPFEVPTIRTALPMVAYDEVLANAGATRPERDAVDNRIIEAVKSRSGQLLKTDP
RDVGGWPDLDAGTPYQDADMDGISDDWETKNGIDPMQADDGQRDMDGDGWSNLEEFLHFM
AGDPDGGVQLPQQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgctggttgcgcgttcaaccgcttcgcgaggatcccgaacctggcacggccccgacctt
gttgcggctccgctgatgttggcagggctaatccttggatcgtggactgggcctctgcgg
caggctgaggctgcaacggcggtccaggaaccgctttcacccaagcttccagacggcagg
cagcgtgcctttcccaccgccgaaggcttcggcgccggttccgttggaggccgaggcggc
aaggtgatctatgtcgttaacacaaacgagaaagggcccggatctctgcgtgattgcgtc
gaagcatccgggccacgcgtttgcattttccgcacaggcggtaccataacgctacgcgag
aagtcgctggttgttcggagtccgttcttgaccattgccggagagacggccccgggcggc
ggggtcgccattcgcaacggtgagaggcaacttcgcccctcaattgaaatctggaccaat
gacgtgatcatacggcacgttcgccttcgccccgggccgcatgcgcgcaaggcttgctgt
tccggcggtctcggaatgtactctgaggcggcgagagacatcatccttgatcatatctcc
gccagctggggatctgacgagacggtcgattcagaagacgccagcaacttcacttggcaa
tggggaattgccagtgagccgctgctgaaaggcggcccggggaaagacgatcgtgcccgc
aacatgctgttcaccaagggcggcaacgtttcagtgcaccactcgctttttgcgttcggc
aggttcagaaatccgcagataaaaatgaaaattccaggcgcggtcgcggatgtcgttaac
aatgtcttcttctcgccagcgtggcaatacgtcgtgagctttggcgatgaatggacgcat
atccaggccaatgtcgtcggcaattacaagatcgcaggaaagaagttgcgcaacgaccac
atggtgcaccttttcaccgaaagcggagagggtcactcgatctatgtcaaggacaactat
gacgaaccctatcgtactcaggctgaccaggatgacagcctggttctggccgaggatcaa
agacggtttgtcgtgaagacgccgtttgaggtgccgacgatccgcacggccctgcccatg
gtcgcctacgacgaagttctggcgaatgccggtgccacaaggccagagcgcgacgcggtc
gacaatcgcatcattgaggccgtcaagagccgcagcgggcaactgctcaaaacggatccg
cgcgacgttggcggatggcccgatcttgatgctggaacgccataccaggacgcggatatg
gacggcatttcagatgattgggagaccaagaacggcatcgatccaatgcaggctgatgat
ggtcaacgggacatggatggtgacgggtggtcaaacctcgaagagtttctccatttcatg
gccggcgatcccgacggcggcgttcaactaccccaacaataa
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