Sinorhizobium fredii NGR234: NGR_c17340
Help
Entry
NGR_c17340 CDS
T00888
Symbol
cobU
Name
(GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
KO
K00768
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:
2.4.2.21
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00860
Porphyrin metabolism
rhi01100
Metabolic pathways
rhi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NGR_c17340 (cobU)
Enzymes [BR:
rhi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.21 nicotinate-nucleotide---dimethylbenzimidazole phosphoribosyltransferase
NGR_c17340 (cobU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBI_PRT
Motif
Other DBs
NCBI-ProteinID:
ACP25498
UniProt:
C3MDH9
LinkDB
All DBs
Position
complement(1790560..1791576)
Genome browser
AA seq
338 aa
AA seq
DB search
MSASGLPFDDFRELLRNLPGPDAAALVAARERDAQLTKPPGALGRLEEIAFWLAAWTGRP
PAVNRPLVAIFAGNHGVTRQGVTPFPSSVTAQMVENFAAGGAAINQICVTHDLGLKVFDL
ALDYPTGDITEEAALSERDCAATMAFGMEAIAGGTDLLCIGEMGIGNTTIAAAINLGLYG
GTAEEWVGPGTGSEGEVLKRKIAAVERAVALHRDHLSDPLELMRRLGGREIAAMAGAILA
ARMQKVPVIIDGYVATAAAAILKAANPAALDHCLIGHVSGEPGHIRAIEKLGKTPLLALG
MRLGEGTGAALAAGIVKAAAACHGGMATFAQAGVSNKD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccagcggcctgccgtttgatgatttccgcgagttgttgcgaaacctgccggga
ccggatgcggcggcacttgttgcggcgcgtgaacgggacgcgcagttgacgaagccgccg
ggtgcgctcggccgtcttgaggaaatcgctttctggctcgccgcctggacgggccgtccg
cctgcggtcaaccggccgctcgtggcgatcttcgccggcaatcacggtgtgaccaggcag
ggcgtcacgccttttccctcgtcggttacggcccagatggtggagaatttcgccgccggg
ggcgcggccatcaatcagatctgcgtgacgcatgacctcgggctcaaggtcttcgatctg
gcgctcgattatccgaccggcgatatcaccgaggaagcggcgctgtccgaacgcgactgc
gccgcgacgatggccttcggcatggaggcgatcgccggcggcaccgacctgctctgcatc
ggcgaaatgggcatcggcaacacgacgatcgccgccgccatcaatctcggcctctatggc
gggacggcggaggaatgggtcggtccgggcaccggctccgaaggcgaagtgttgaagcgc
aagatcgccgcggtcgagagggctgtggcgctgcatcgcgatcacctgtccgatccgctc
gaactgatgcgccggctcggcgggcgcgagatcgccgccatggcgggcgccatcctcgcg
gcgcgcatgcagaaggtgcctgtgatcatcgacggctacgtggcgacggccgctgcagcg
atcctcaaggctgccaatccggcggcactcgaccattgcctgatcggccatgtctcggga
gaaccggggcacatccgcgccatcgaaaagctcggcaagacaccactcttggcgctcggc
atgcggctcggcgagggcacgggcgccgcacttgccgcaggcatcgtcaaggcggctgcc
gcttgccatggcggaatggcgaccttcgcccaggccggcgtcagcaacaaggactga
DBGET
integrated database retrieval system
