Rhizobium hidalgonense: FFM81_000890
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Entry
FFM81_000890 CDS
T07043
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid02024
Quorum sensing
rhid03060
Protein export
rhid03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FFM81_000890 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FFM81_000890 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FFM81_000890 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhid02044
]
FFM81_000890 (ffh)
Enzymes [BR:
rhid01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
FFM81_000890 (ffh)
Secretion system [BR:
rhid02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FFM81_000890 (ffh)
Eukaryotic Sec-SRP protein
FFM81_000890 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_33
Zeta_toxin
AAA_30
DnaB_C
AAA_22
AAA_31
AAA_17
AAA_25
AAA_19
ArsA_ATPase
6PF2K
AAA_14
AAA_5
ResIII
APS_kinase
AAA
Thymidylate_kin
AAA_7
NACHT
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QKK22004
LinkDB
All DBs
Position
complement(202102..203676)
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AA seq
524 aa
AA seq
DB search
MFENLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTDRVREKAV
GAEILKSIKPGQMVVKIVHDELIEMLGGEGVGIDLHAAAPVVVMMVGLQGSGKTTTSAKI
AHRLSTRDKKKVLMASLDTRRPAAQEQLRQLGAQASIDTLPIIAGQSPTDIAARAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIKKRSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMSELEEFHPRRIADRILGMGDI
VSLVERAAENIDAEKAAAMAAKMAKGKFDLDDLADQLRQMQKMGGMGGIMGMMPGMAGMK
DKMAAAGLDDKLFGRQIAIIQSMTRAERANPDLLKHSRKKRIAAGSGTDAAAINKLLKMH
RQMADMMKMMGGKGKGGMMKQMMGGLAGKMGLGGGMGGMPDLSNIDPRQLEALQKQAEAA
GLGKPGGGMPGLGGLSGGLPGLGGAKLPGLGGGFPGLPGLPKKK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctccaggaccgtcttggatccattctgaatggactgacaggccgtggc
gcgctttcggaagccgatgtttccgcagcgctgcgcgaggttcgccgtgcgctgctggag
gccgacgtcgcgctcgacgtcgtgcgttccttcaccgaccgcgtgcgtgagaaggccgtc
ggcgccgagatcctgaagtcgatcaagccgggccagatggtcgtcaagatcgtccatgac
gaactgatcgagatgctgggcggcgaaggcgtgggcatcgacctgcatgcggccgctccc
gtggtcgtcatgatggtcggcctgcagggctccggcaagacgacgacgtcggccaagatc
gcccatcgcctgtcgacgcgcgacaagaagaaagtgctgatggcgtcgctcgacacgcgc
cgtccggccgcccaggagcagctacgccagctcggcgcccaggccagtatcgatacgctg
ccgatcatcgcgggccagtcgccaaccgacatcgccgcccgcgccgtgcaggctgcgaag
ctcggcggccatgacgtcgtcatcctcgataccgccggccgcactcatatcgacgagccc
ttgatggtcgagatggccgatatcaagaagcgctcgaacccgcatgaaatcctgctggtc
gccgactcactgaccggtcaggatgccgtcaatctcgcccgcaacttcgacgaacgcgtc
ggcatcaccggtctggttctgacccgcatggacggcgacggccgtggcggtgcggccctt
tcgatgcgcgccgtcaccggcaagccgatcaagctgatcggtgtcggcgagaagatgagc
gagctcgaggagttccatcctcgccgcatcgccgaccgcattctcggcatgggcgatatc
gtctcgctcgtcgaacgtgccgcggagaatatcgacgccgagaaggcggccgccatggcc
gccaagatggccaagggcaagttcgatctcgacgaccttgccgatcagctgcgccagatg
cagaagatgggcggcatgggcggcatcatgggcatgatgcccggcatggccggcatgaag
gacaagatggccgcagccggcctcgacgacaagcttttcggccgccagatcgccatcatc
caatcgatgacgagggccgagcgtgccaatcccgacctgctcaagcattcgcgcaagaag
cgcatcgccgccggctccggcaccgatgccgccgccatcaacaagcttctgaagatgcac
cgccagatggccgacatgatgaagatgatgggcggcaagggcaaaggcggcatgatgaag
cagatgatgggcggccttgccggcaagatgggacttggcggcggtatgggaggcatgccc
gatctctcgaatatcgatccccgccagctcgaggccctgcagaagcaggccgaagcggcg
gggcttggaaaaccgggtgggggtatgcccggtctcggcggtctgtcgggtggtttgccg
ggcctcggcggcgccaagctgccgggcctcggtggtggtttcccgggattgcccggattg
ccgaagaagaagtga
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