Rhizobium sp. Pop5: NE852_17020
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Entry
NE852_17020 CDS
T11439
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NE852_17020 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhip03400
]
NE852_17020 (ung)
Enzymes [BR:
rhip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NE852_17020 (ung)
DNA repair and recombination proteins [BR:
rhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NE852_17020 (ung)
Prokaryotic type
NE852_17020 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UVD55783
LinkDB
All DBs
Position
complement(3000043..3000744)
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AA seq
233 aa
AA seq
DB search
MSDTSVSLEESWKVALEGEFSSPYMQQLKSFLVAQKQVGKRIFPKGSEYFRALDLTPVTQ
VKAVILGQDPYHGLGQAHGLCFSVRPGVRIPPSLVNIYKEMETDLGIAPARHGFLEHWAR
QGVLLLNSVLTVEEGQAAAHQGKGWERFTDAVIRKVNDECESVVFMLWGSYAQRKAAFVD
TARHLVLKAPHPSPLSAHNGFFGCKHFSKANAFLQSRGREPIDWQLPTDPHSG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacgtccgtcagtcttgaggagagctggaaggttgcgctggagggggagttt
tcaagcccctacatgcagcagctcaaatccttcctggtcgcacagaagcaggtcggcaaa
cggatattccccaagggaagcgaatatttccgcgccctcgatctgacgccggtcacacag
gtcaaggcggtcatcctcggccaggacccttatcacggcctcgggcaagcccatgggctg
tgcttcagcgtccggccgggcgtgcgcataccgccctcgctcgtcaatatctataaggag
atggagacggatctcggcattgcgccggcgcggcacggttttctcgagcattgggcaagg
cagggcgtgctcctgctgaacagcgtgctgaccgtggaggaagggcaggcggccgcccac
caggggaagggctgggaacgcttcaccgatgccgtcatccgcaaggtcaatgacgaatgc
gagtccgtcgtcttcatgctctggggctcctatgcccagcgaaaggctgctttcgtcgat
acggcgcggcatctggtcctcaaggcgccgcatccttcgccgctttcggcccataacggc
tttttcggctgcaagcatttttccaaggcgaatgctttcctgcagtcgcgcgggcgcgaa
ccgatcgactggcagctgccgaccgatccgcatagtggttga
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