Rhizobium sp. Kim5: Kim5_CH00149
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Entry
Kim5_CH00149 CDS
T05501
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00541
Biosynthesis of various nucleotide sugars
rhk01100
Metabolic pathways
rhk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Kim5_CH00149 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhk01005
]
Kim5_CH00149 (kdsB)
Enzymes [BR:
rhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
Kim5_CH00149 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rhk01005
]
Lipid A
Kim5_CH00149 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Mrr_cat
Motif
Other DBs
NCBI-ProteinID:
ARQ56274
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Position
complement(155187..155933)
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AA seq
248 aa
AA seq
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MSLDEVLVLIPARMASTRLPGKPLADICGRPMIVQVAMRAKEAAIGRVVVAVDDQQVFDA
VSAAGFDVVMTSRDHQSGSDRIFEALTKVDPAGKAKIIVNVQGDLPTIDPETVRAALRPL
DNEAVDIGTLTTEIDNEEDKTAPHIVKIVGSPVSDTRLHALYFTRATAPHGKGPLYHHIG
LYAYRRAALERFVSLGPSTLEKRESLEQLRALEAGMRIDVEIVDTVPLGVDTPADLEKAR
RILSARTG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagacgaggtgctcgtattgatcccggcgcgcatggcctccacccggcttccg
ggcaagccgctcgccgatatttgcggccggccgatgatcgtgcaggtggcgatgcgcgcc
aaagaggcagccatcggccgcgtggtcgtcgccgtcgacgaccaacaggtgttcgatgcc
gtttccgccgctggcttcgacgtcgtcatgaccagcagggatcatcaatcgggttccgac
cggatcttcgaagcgctgacgaaagtcgatcccgccggcaaggcgaaaatcatcgtcaat
gttcagggcgacctgccgacgatcgatccggaaaccgtgcgcgcggccctgcgcccgctc
gacaacgaggcggtcgatatcggcacgctgacgaccgaaatcgacaatgaggaggacaag
accgcgccgcacatcgtcaagatcgtcggttcgccggtctcagatacccgcctgcacgcc
ctctacttcacgcgcgcgactgcacctcacggcaaggggccgctctatcaccatattggc
ctttatgcctatcggcgtgcggcgctggagcgattcgtctcgctcggcccgtcgacgctc
gaaaagcgggaatcgctcgagcagttgcgggcgctggaggccggtatgcgcatcgacgtg
gagatcgttgacacggttccgctcggtgtcgatactccggccgaccttgaaaaagcgcgg
cgcatcctctccgccagaacaggatga
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