KEGG   Rhizobium sp. Kim5: Kim5_PA00290
Entry
Kim5_PA00290      CDS       T05501                                 
Name
(GenBank) type VI secretion system DotU/OmpA/MotB outer membrane protein
  KO
K11892  type VI secretion system protein ImpK
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Kim5_PA00290
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PA00290
Secretion system [BR:rhk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Kim5_PA00290
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: ARQ60760
LinkDB
Position
pRetKim5a:247594..248883
AA seq 429 aa
MMVIEETMPKSQPLVLLHAEEQLAVPSPSSPVADELTWEMLALDRLNPLVAAAAALLGLS
AQLKSSASHIDVEALRLRVLREIDAFERRITPLGLPSRAIKVCKYALCATIDDIVLNTAW
GSNSVWTTRSLVGSLFSDTWGGERFFDLLTQLKNEPAINIELLELLYYCMRLGFEGRYRV
TAGGAAELSVLCEDVYRLIRAARGDFERELSPHWRRNSNNPKPRRTIVPIWAVVAFGAGL
LLSIYTGLLHALNARADAVFNDIATLPPNGVVRSARIALPPKVVMSSDRLRNFLEPEIRE
GLVTVSEDPQQIVVIIRASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDAI
PVQSLAFPSNDSLSLARASAAAEIIKSMMDDPGRVREEGRGSGEPVASNHTPEGRARNRR
IQIIITKTQ
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgatggtgattgaggaaacgatgccaaaatcccagccactcgtcctccttcacgccgag
gagcagttggctgtcccttcgccgtcatcgccagtggcggacgaacttacctgggagatg
cttgcgctcgaccgacttaatccactggtcgcggccgcggcggcgctgctgggtctcagc
gctcagctcaagagcagtgctagccatatcgacgttgaagcactgcgccttagggtgctg
cgggagatcgatgcttttgagcgtcggatcacgccgctcggattgccctcgcgagcgatc
aaggtctgcaaatacgccctctgcgcgaccatcgatgacatcgttctgaacacagcctgg
ggcagcaacagcgtctggacgacgcgcagcttggtgggatcgctgttcagcgatacctgg
ggcggcgagcgcttcttcgatctgctgacgcaattgaaaaatgaaccggccatcaatata
gaactgctggagctgctctactactgcatgaggttgggcttcgaaggccgctaccgcgtc
actgcgggaggagccgcagagctcagtgtgctgtgcgaagacgtctaccgcctgatccga
gcagcccgtggtgacttcgagcgcgaactatccccgcactggcggaggaactcaaataat
ccgaagccacgccgcacaatcgttccaatctgggccgtcgtagcgtttggggcaggatta
ctcctctcgatctataccggactcctgcatgcattaaatgcccgcgccgacgctgtcttc
aacgatatcgcgacattgccgccgaacggcgttgtcagatcggcgagaatcgcattgcca
ccaaaggttgttatgagcagcgaccgactgcgtaacttcctcgagcccgaaatccgcgaa
gggcttgtcactgtgtccgaggacccacagcagatcgtcgttatcattcgcgcctccggg
atgttcgattctgctagtccggaagtgaagaaaatgttcctgccgcttcttttacgaatt
ggtcgttctctgaacggtgagtcgggatcggtcctcctgaccgggcacaccgacgccatt
ccggtgcaatcactcgccttcccttcaaacgattccctttcgctcgcgcgtgcgagcgca
gctgccgagattatcaaatccatgatggatgacccaggccgcgtgcgagaagagggcaga
gggagcggagaaccggtcgcttcgaaccacacgcccgagggccgcgcgcggaaccgtcgg
attcaaatcatcatcacaaagacacaatga

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