Rhizobium sp. Kim5: Kim5_PB00297
Help
Entry
Kim5_PB00297 CDS
T05501
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_PB00297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PB00297
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Kim5_PB00297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_16
nSTAND3
AAA_19
AAA
DEAD
SMC_N
TsaE
AAA_29
Mg_chelatase
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ARQ61260
LinkDB
All DBs
Position
pRetKim5b:complement(315294..316193)
Genome browser
AA seq
299 aa
AA seq
DB search
MSEAILALDTVTKTFGHGASVVYAARSISFSLRAGRALALVGESGSGKTTCARMAMREYL
PRSGRILYKGRPVETANSAEIARYRRSVQMIFQDPFASLNPAHTIAHHLRRPLKLHRPDI
KGIEIDATIRELLERVRLDPDLVAPKYPHELSGGQRQRVNIARALAVKPEVIVADEPTSM
LDVSVRLGVLNLLNEMKREMNLGLLYITHDIATARYVAEDIAVMYAGQIVEWGSTARVID
NPLHPYTRLLLSAVPDPDVRFDDPKARLRPDEVEDIRRRSAAPQDAVAEVEPCHFMRMV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagccatccttgcgctcgacacggtgacaaagaccttcggccacggtgcatct
gtcgtttatgctgcccgctccatctcgttttcgctgcgcgctggccgggcgctggcgctc
gtcggcgaatccggcagcggcaagaccacctgcgcccgcatggcgatgcgcgaatatctg
ccgagatcgggccgcatcctctacaagggccggccggtcgagacggcgaattccgctgaa
atcgcccgctaccgccgctccgtgcagatgatcttccaggatcccttcgcttcgctgaac
cccgcccataccatcgcgcaccatctccgtcggccgctgaaactgcatcgccccgatatc
aaggggattgaaatcgacgcgacgatccgcgaactgctggagcgcgtcaggctcgatccc
gatctcgtcgcgccgaaatatccgcatgaactctccgggggccagcgccaacgcgtcaac
atcgcccgcgcccttgccgtcaaaccggaagtgatcgtggcggacgaaccgacctcgatg
ctcgatgtctccgtgcgcctcggcgtgctcaacctgttgaacgagatgaagcgggagatg
aatctcggtctgctctacatcacccatgatatcgccaccgcccgttatgtcgccgaggac
atcgccgtgatgtatgccggccagatcgtcgaatggggcagcaccgcccgagtgatcgac
aatccgctgcatccctataccaggctgctgctctcggccgtgcccgatcccgacgtccgt
ttcgacgatccgaaggcgcgcctgaggcccgacgaggtcgaggatatccgccgccgttcg
gccgcaccgcaggacgctgtcgccgaggtggagccgtgtcattttatgcggatggtctga
DBGET
integrated database retrieval system
