Rhizobium sp. Kim5: Kim5_PD00541
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Entry
Kim5_PD00541 CDS
T05501
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_PD00541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PD00541
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Kim5_PD00541
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
oligo_HPY
RsgA_GTPase
AAA_22
AAA_16
nSTAND1
AAA_25
AAA_23
nSTAND3
Mg_chelatase
ATP-synt_ab
DUF87
NACHT
NB-ARC
Sigma54_activat
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
ARQ62545
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Position
pRetKim5d:572279..573910
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AA seq
543 aa
AA seq
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MPELLSVRNLKIEATSYPPGEAPKRVTIVDGVSFDLQKGKVLGLIGESGAGKSTIGLSAL
AYGRGGAEITGGEVLLAGTDILALGKNGIRKIRGARVCYVAQSAAAAFNPAHRLGDQVIE
ASVKHGLMSREEARKRALYLFRVLGLPNPETFGERFAHQVSGGQLQRAMTAMALCSNPEL
IVFDEPTTALDVTTQIDVLAAIKHAIEETHTAALYITHDLAVVAQISDDIMVLRHGKQVE
YGSVQQIIEAPRQDYTRALVNVRQAYREEAADQSTALLKVENVSAEYSNGFKVLHDVSLH
VPKGQTLAVVGESGSGKSTLARVITGLLPPSSGRVVFAGKPLMPGLKSRPNDDLRRIQLI
YQMADTAMNPRQTVRDIIGRPLTFYYGLRGGAKTARVKELLDQIEMGNGFIDRYPAELSG
GQKQRVAIARALAAKPELILCDEPTSALDPLVAEGILKLLLRLQQEEQLSYVFITHDIAI
VRAIADSVAVMHRGRLVRFGPKSTALSPPFDDYTDLLLKSVPEMEIGWLERVLTTRKMAS
AGN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttctttccgttcgcaatctcaaaatcgaagcgacgagctacccgcccggt
gaagcgcctaagcgggtaacgatcgtcgacggcgtttctttcgacctgcagaagggcaag
gttctcggcctgatcggagagtcgggcgcgggcaagtcgacgatcggcctctcggcgctt
gcctacggccgcggcggcgccgaaatcaccggcggcgaggtgctgctcgccggcaccgat
attctggcgctcggcaaaaacggcatccggaaaatccgcggcgcacgggtctgctacgtc
gcgcaatcggctgccgccgccttcaatccggcgcataggcttggcgatcaggtgatcgaa
gcatccgtcaagcatggattgatgagcagggaggaggcgcgcaaacgtgcgctttatctc
ttccgtgtcctcggcctgcccaatcctgagactttcggcgaacgcttcgcccaccaggtc
tccggcggtcagctgcagcgcgcgatgacggcaatggcgctctgctcgaatcctgaactc
atcgtcttcgacgagccgaccacggcacttgacgtcaccacgcaaatcgacgtgctggca
gcgatcaagcatgcgatcgaggagacccatacggccgccctctacattacccacgatctt
gccgtcgttgcccagatttccgacgacatcatggtcctgcgccatggcaagcaggtcgaa
tatggcagcgttcagcagatcatcgaagcgccgcgacaggactatacccgggcgctcgtc
aatgtcaggcaggcctatcgcgaggaagccgccgatcagtccacggcccttctcaaagtg
gagaatgtcagcgccgaatattcgaacggcttcaaggtgctgcacgatgtctcgctgcat
gtaccgaaggggcagacgcttgccgtcgtcggcgaatccggttccggtaagtcgaccttg
gcacgcgtcattaccggtctcttgccgccgagcagcgggcgcgtcgtctttgccggcaag
ccgctgatgcccggtctcaagagccggccgaacgacgacctcagacgcatccagctgatc
tatcagatggccgatacggcgatgaacccgcggcagacggtgcgcgacattatcggccgg
ccgctgaccttctattacggcctgaggggtggggcgaaaaccgcacgggtgaaggaactg
ctcgaccagatcgaaatgggcaacggcttcatcgatcgctacccggccgaactgtccggc
ggtcagaagcagcgtgtggcaatcgccagagcccttgccgccaagccggaactcatcctt
tgcgacgagccgacttcggcgctcgatccgctggtggcggagggcatcctcaagctgctg
ctgcgcctgcagcaggaagaacagctatcctatgtcttcatcacccatgacattgcgatc
gtccgggcgatcgccgacagcgtggcggtgatgcatcgcggcaggctggtgcggttcggg
ccgaaatcgacggcgctatcgccgcccttcgacgactacaccgacctgttgctgaaatcc
gtacccgagatggagatcggctggctggagcgggtgctgacgacgcgaaagatggcaagc
gccgggaattga
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